Strigops habroptila (Kakapo): 115606790
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Entry
115606790 CDS
T08851
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04620
Toll-like receptor signaling pathway
shab04621
NOD-like receptor signaling pathway
shab04622
RIG-I-like receptor signaling pathway
shab05164
Influenza A
shab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115606790 (TRAF3)
04621 NOD-like receptor signaling pathway
115606790 (TRAF3)
04622 RIG-I-like receptor signaling pathway
115606790 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115606790 (TRAF3)
05168 Herpes simplex virus 1 infection
115606790 (TRAF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
Sina_ZnF
ATG16
zf-C3HC4_2
FliJ
Spc29
zf-RING_UBOX
Tropomyosin
KxDL
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
115606790
NCBI-ProteinID:
XP_030339139
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All DBs
Position
4:complement(22699227..22773821)
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AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELSCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacggaacctcctttatctgtagaaatggtacaacaaagagcc
aatcctgatcgcagtccttcagcatcgatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgccgtggaagataagtataaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtgggcacagattctgtgagacctgcatgaatgccttgcta
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaggaacagctatctttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaactctcgtgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgataatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcacttacagcga
gtgatagacagtcaagcagagaaactcaaagaactggacaaagaaatccgtcctttccga
cagaactgggaggaggctgacagcatgaagagcagtgtagaatccctccaaaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgagcagacatgatcagatgctgagtgttcatgatatccggctggctgac
atggacctccgattccaagttttggaaactgccagttacaacggagtattaatttggaaa
atccgagattataaacgtcggaagcaagaggcagtcatggggaagaccttgtccttgtac
agccaacccttttatactggatacttcggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacctgtcactgttttttgtcataatgcgtggagaa
tatgatgcgttgcttccttggccatttaaacagaaagtgactctcatgctgatggatcag
ggaccgtctcgacgccacttaggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatccggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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