Strigops habroptila (Kakapo): 115607065
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Entry
115607065 CDS
T08851
Symbol
ABCD4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab02010
ABC transporters
shab04146
Peroxisome
shab04977
Vitamin digestion and absorption
shab04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115607065 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115607065 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
115607065 (ABCD4)
04980 Cobalamin transport and metabolism
115607065 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115607065 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115607065 (ABCD4)
Enzymes [BR:
shab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
115607065 (ABCD4)
Membrane trafficking [BR:
shab04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
115607065 (ABCD4)
Transporters [BR:
shab02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
115607065 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
SbmA_BacA
AAA_7
AAA_22
nSTAND1
AAA_23
nSTAND3
IRK
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
115607065
NCBI-ProteinID:
XP_030339693
LinkDB
All DBs
Position
4:36448554..36463601
Genome browser
AA seq
624 aa
AA seq
DB search
MAGGSGWARGAGAGGRSGPRLDGLFVRRFLRLQAVLFPGWPSPSALMFLTLLCVALLEQL
VVYQVGVIPSQYYEVLGNKDFSGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSL
TEYLHSCYFRGQVYYSLHTLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYT
YQCFHSTGWLGPVSIFGYFIIGTIVNKILMSPIVAKLVQQEKLEGDFRFKHMQIRVNAEP
AAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVAIAIPIFS
GVCGDLSPSELSALVSKNAFVSIYLIGCFSQLIDLSRSVTDVAGYTHRIGELQETLLSLG
RKKSGNRSEAKASWDLDEWWPRSHSREDPLPRDTAFLLERVTLSVPSSGKLLIKDLSLRI
SQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPQGVVFLPQQPFFTDGSLR
EQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGGLDEQVDWNWYDILSPGEMQR
LSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILK
LHGEGRWELTRCEKMKRLPAGEGC
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcagcggctgggcgaggggcgccggggctggcggccggtctggcccccgg
ctggacgggctgttcgtgcggcggttcctgcggctgcaggctgtgctcttccccgggtgg
ccctcccccagcgccctgatgttcttgacgctgctctgtgtcgccttgctggagcagctg
gttgtttaccaggttggcgtcatccccagccagtactatgaggttttagggaacaaggac
ttctccgggttcaaaacgctgacagccgttgccctgactctgatcgtagtaaactccacg
ctaaaaagcttcgaccagtttatctgcaacatgatgtatgtgagctggaggaaatccctc
actgaatacctccacagctgctacttccgaggccaggtctactacagcctgcacacgctg
cgcgaggacatcgataacccggaccagcgcatcagccaggatgtggagaggttctgcagg
cagctcagctccatggccagcaagctcatcatctcgcccttcacactggcctactacacg
taccagtgcttccacagcacaggctggctaggcccagtgagcatctttggatatttcatc
attgggacaatcgtcaacaagatactgatgagcccaattgtagctaaacttgttcagcag
gaaaaactggaaggggatttcaggttcaagcatatgcagattcgtgtcaatgcagaacca
gctgctttctacagggccgggcgagtggagcatatgcgcacggaccggaggctgcagagc
ctgctgcagacacagagggagctgataggcaaggagctctggctatacattggaatcaac
acctttgactacctgggcagcatcctgagctacgtggccattgccattcccatcttttct
ggggtctgcggtgacctgagtccatcagagctcagcgccctcgtcagtaagaatgccttt
gtttccatctacctcattggctgcttcagccagctcatagacctctcccgttccgtgacc
gatgtagctggctacacgcacaggattggtgaactgcaggagaccttgctgagccttggc
agaaaaaaaagtggtaaccgctcagaagccaaagccagctgggatttggacgagtggtgg
cccaggagccattctagggaggacccactgccaagggacacagccttccttctggagcga
gtgacgctctcggtgccatcctctggcaagctgctcatcaaggacttgagcctcaggatc
tcacaaggaaacagtgtgatgattgtggggaacactggcacagggaagacatctctcctg
agggtccttgggggactctgggagagcacgcaggggagtatcaagatgctgacctgcttt
ggccctcagggagtggtgttcctgccgcagcagcccttcttcactgatggaagtctgcgt
gagcaggtgatctatcccctgaaggagatctatccagtttcaggatctgcagatgatgag
agaattgtgcgattcctggagctggctgggctgactgacttgctggcgagggctggagga
ctggatgagcaggtggactggaactggtatgacatcctctccccaggggagatgcagagg
ctctcgtttgcacggctcttctacctccagccaaaatatgcggtgctagatgaagccacc
agcgccctgaccgaagaggtggagcatgaactgtaccgtgtgtgccttcagctgggcatg
acgctgatcagtgtgggacacagggccagcctggaaaagttccacagctggattttgaag
cttcatggggagggaagatgggagctcactcgatgcgagaagatgaagcggctcccagct
ggggaaggatgctga
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