Strigops habroptila (Kakapo): 115607609
Help
Entry
115607609 CDS
T08851
Symbol
NTHL1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115607609 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115607609 (NTHL1)
Enzymes [BR:
shab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
115607609 (NTHL1)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115607609 (NTHL1)
Prokaryotic type
115607609 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
115607609
NCBI-ProteinID:
XP_030340965
UniProt:
A0A672UBM2
LinkDB
All DBs
Position
4:complement(85041191..85047628)
Genome browser
AA seq
289 aa
AA seq
DB search
MCAAGAAGGGRAAARRLGRAGEAAGASQPAGIPRRSSRRRRRSVTIAYECEAEQGTPEPQ
KPRWEPRDWRQQLERIREMRKNRDAPVDDMGVQKCYDSSAPPQVMRYQVLLSLMLSSQTK
DQVTWAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYIKQTTAILKQKYGGD
IPRSVEELVQLPGVGPKMAHLAMNIAWDSVSGIAVDTHVHRITNRLQWVKKETKYPEETR
VALEEWLPRDLWREINWLLVGFGQQTCLPVNPRCSECLNQDICPAAKRH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggccggggccgccggcggtgggcgggcagcggcccggcggctcggcagggcc
ggggaggcggccggagcgagccagccagccggcatcccgaggcgcagcagcaggaggagg
aggaggagtgtcaccattgcctatgaatgtgaggccgagcaggggacaccggagccccag
aagccacgctgggagcccagggactggcggcagcagctggagcgcatccgggaaatgagg
aagaacagggatgctcccgttgatgacatgggagtgcagaagtgttatgacagcagcgcg
cctccacaggtcatgcgctaccaggttctgctgtcactgatgctgtccagccagaccaag
gaccaggtgacatgggctgccatgctgcgcctccggcagcgcggcctcaccgtcgacagc
attttgcagatggatgatgccacgcttgggcagatcatttatcccgtgggattctggagg
aacaaggtgaagtacataaagcagacgacagccatcctgaagcagaagtatgggggagac
attccgagaagtgtggaggagctggtgcagctgccaggagttgggcccaaaatggctcac
ttggccatgaacatcgcctgggacagtgtgtctgggatagctgtggacacccacgtgcac
aggatcacaaacaggctgcagtgggtgaagaaggagaccaaataccctgaggagactcgg
gtggcactggaggagtggctgcccagggatctctggagggagataaactggctcctggtg
ggctttggccagcagacctgcctgcctgtgaacccgcgctgcagcgagtgcctcaatcaa
gacatttgcccagctgctaagagacactga
DBGET
integrated database retrieval system
