Strigops habroptila (Kakapo): 115607720
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Entry
115607720 CDS
T08851
Symbol
EXD2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115607720 (EXD2)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
115607720 (EXD2)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115607720 (EXD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PP_M1
RRXRR
Cas_CXXC_CXXC
Motif
Other DBs
NCBI-GeneID:
115607720
NCBI-ProteinID:
XP_030341193
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Position
4:47551518..47574621
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AA seq
631 aa
AA seq
DB search
MPRKDDRSVTQIVTSMRCSAEPLVSPCSVRLHTPCTQVTVADGQILLCNMSSKPQYRQAK
TLSIVICVYYPSFRHRSSTFSWVERILGADIMVVSEQKEWDHVEPLLKKELEKWPVLGID
CEWVSVEGKANPVSLLQMASSSGLCILVRLPRLVASGQTIPKTLLDIMADSAVLKVGVGC
WEDACKLLHDYGLPVKGSVDLRYLAMRQWKDLPHNCLSLKSLAEEVLNCPLDKSPHVRCS
NWEAEELTQDQVLYAARDAQVSVALFLHLLGFASLPAISQGENSLAAWEKAVGKCRGLVD
IPFKGRKSGSTGEEKNGEGHSPQKTKNRKSAVDGQPAGSQQVRDPRRQKRKPLGVGYSAR
KSPLYDNCFLHAPDGQPLCTCDRKKAQWYLNKGIGELVSTDPFVVKLRFEPSGRPESQVD
YYLTVKENLCVVCGKRESYIRKNIVPHEYRRHFPIQMKDHNSHDVLLLCTSCHAISNYYD
NHLKQQLAEEFGAPIGSEEGVRLLEDPLRRQVRSGARALLNADGLPDPRRAELLQSIKDF
FNTERVTPEMLQEAAGLETRICNESYVPHGLKVVQCFAKGGLRSLMQLERRWRQHFLDNM
QPKHLPEQWSVDHNHTKLIRKYGEDLQIELS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtaaagatgacaggagtgtcactcaaatagtgacatccatgaggtgcagtgcg
gagcccctagtctcaccttgcagtgtccgactgcatactccctgcacccaagttacagtt
gctgatggccaaatattgctatgtaacatgtctagcaagcctcagtacaggcaggcaaag
accctgtccatcgtgatttgtgtttattaccctagcttcagacacagatcttccacgttt
tcctgggtagagaggatccttggtgcagacataatggtagtttcagagcagaaggagtgg
gatcatgttgaacctttgctgaagaaggagctggagaagtggccagtgcttggaattgat
tgtgaatgggtatctgtggagggaaaagcaaatcctgtatccctcctgcagatggcttct
tccagtggcctctgcattcttgttcgattgcccaggcttgttgccagtggacagactatc
ccaaagaccctgttggacatcatggcagatagtgctgtgttgaaagttggggtaggatgc
tgggaagatgcttgcaagttacttcatgattatggtcttccagtcaaagggagcgtggat
ctccggtatctagccatgagacagtggaaggatctacctcacaactgccttagcctaaag
tctttagctgaagaagtcctgaactgcccgcttgacaagtctcctcatgtgcgttgcagc
aactgggaggcagaagaactgacacaagatcaggttctctatgctgctagagatgcccag
gtctcagtggctctgttcctccatttgctgggatttgccagcctccctgctatatctcaa
ggtgaaaactctcttgctgcttgggaaaaagcagtgggtaaatgccggggcttggtggat
attccttttaaaggaagaaagagtggcagcacaggagaggagaagaatggagagggacat
tcccctcagaaaacaaagaatcggaagtctgcagtggatggccagcctgctggcagtcag
caagtgagagatccacggaggcagaagagaaagcctctgggtgtgggatattctgcacga
aaatctccactgtatgacaactgtttcctgcatgcaccagatggacagcccctgtgcact
tgtgatcgcaagaaggctcagtggtatctgaacaaggggattggagagctagttagcaca
gacccatttgttgtgaagctgcggtttgagccttcgggacgtcctgagtctcaagttgat
tattatctgacagtcaaagagaacctgtgtgttgtatgtggcaagcgagaatcctatatc
cggaaaaacattgttcctcacgaataccgaagacacttccctatccagatgaaggaccac
aactcccatgacgtgctcctactctgcacatcctgccatgccatctccaattactatgat
aaccatctcaagcagcagctggctgaggagtttggtgcacccattggctctgaggaaggt
gtgcgtctgctggaggaccctctgcgcaggcaagtgcgctcgggggcccgagccctgctg
aatgcagatggactgcctgacccccgaagggcagaacttctgcagagcatcaaggacttc
tttaacacagagagagtcaccccagagatgctccaggaagcagctggtctggaaaccagg
atctgcaatgagagctacgtgccacatggcctgaaggtggtgcagtgttttgctaaagga
ggcctgcgctcccttatgcagttggagagacgctggcggcagcattttttggacaacatg
cagcccaagcacctcccagagcagtggtcagtggaccataaccacacgaagctgatccga
aagtatggggaggatcttcagatcgagctgtcataa
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