Strigops habroptila (Kakapo): 115611999
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Entry
115611999 CDS
T08851
Symbol
TRPM2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2 isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115611999 (TRPM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115611999 (TRPM2)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
115611999 (TRPM2)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115611999 (TRPM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF496
Csx1_HEPN
Motif
Other DBs
NCBI-GeneID:
115611999
NCBI-ProteinID:
XP_030351623
LinkDB
All DBs
Position
8:complement(47106944..47127084)
Genome browser
AA seq
1508 aa
AA seq
DB search
MAMRGWCTKVLPSELNKVCSERGDDSATRPRKMSDFEVVPNLQQSSSSVSKSRRKAHFPS
SSNEKENLISWIPENIRKKECTYFVESSQTSDSGRVVCECGYLREQHLEDAAKPPISLGK
EWDPRTHIREMPTDAFGDIHFRGLGQKMGKYVRVSSDTPPWVIYHLMTHHWGLDAPNLLI
SVTGGAKNFIMKPRLKNIFRQGLVKVAQTTGAWIITGGSHAGVMKQVGEAVRDFILSCSH
KESEIVTIGVATWGTVYNRESLIWPMGGFPAEYVLDEENQGSLSCLDSNHSHFILVDDGT
HGRYGVEIPLRTRLEKFISEQTKVKGGVAIRIPIVCVVLEGGPGTLDTIYNAITNGTPCV
IVEGSGRVADVIAQVASLPVPKITIALIQKKLSVFFRDTYEQFTEGKVVEWTKKIQDIVR
SRQLLTIFREGKYGQQDVDVAILQALFKASRNQDNFGCENWDYQLKLAVAWNRVDIARSE
IFTDDHEWKPTDLHPVMAAALISNKPEFVKLFLEQGVRLKEFVTWDTLVYLYDNMAPSCL
FHSKLQKVLLEEREHMAGSKMPRIQLHHVSQVLRELLGCSTQPLYPKPKHTERPRPSIPV
PHINLNVQSSSLRSLYKRSAGRATFTMDPVRDLLIWAVVQNRKQLAEIIWAQSQDCMAAA
LACSKILKELAKEEEDTDTTEDMLALAEQYEQKAMGVFTDCYRKDEERAQKLLTRVSEAW
GKTTCLQLALEAKNMNFVSHGGVQAFLTKVWWGQMCVDNGLWQVIACTLFFPLLYTGLIT
FREKRLQPMGCMTRLRAFFTAPVVIFYMNILSYFTFLLLFAYVLMVDFQPVPSWWEYLLY
FWLFSLVCEETRQLLYDPDGFGVVKMASLYFKDFWNRLDICAILVFITGLTCRLIPSTLY
PGRIILSLAFIIFCLRLMHIFTVSKTLGPKIIIVKRMMKDVFFFLFLLAVWVVSFGVAKQ
AILIHNEERVEWLFRGVVYHSYLTIFGQIPSYIDGVNFNIDQCSPNGTDPYKPKCPETNE
DNKKPIFPDWLTVILLCLYLLFTNILLLNLLIAMFNYTFQQVQQHTDQIWKFQRHDLIEE
YHGRPPAPPPFILLNHLQILVQRGLLHRPATSHRQLKEKLEKNEEAALLSWEMYLKESYL
QNQQCREKQNTEQKIRDIAQRVDMLADLLDLDRVKRTGLVEWRLISLEDQVHQSAQALRW
IMQALQDNGFSAGEDVPSVGSGKALETKEVGLEGKPEESQSPYHVLARNLLYPGSHTRRF
PVPDEKVPWEVDFALYDPPTYSAEHKDMAVQDPFSLSLESLLKINYNTMDGLIDRQSFHG
LYIVQDGLPLNPMGRTGLRGRGRLHCFGPNHALHPIVTRWRRNLDGSIIRKSLKKMLEVL
VAQYPLSDVWALPGGSLEPGETLPLKLKWILRREFWPQFQNLLKQGTEVHKGYLDDPRNT
DNAWVETVAVSVHFNSQNDVEMKRLNSFLQGCDPELCIRWQVLDKRIPLHANHKKFLHKI
STLLDAYY
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgtggctggtgtaccaaggtgctcccctcagaactgaacaaggtgtgctct
gagagaggagatgattctgccacccgccccaggaagatgagtgacttcgaggtggtcccc
aacctccagcagagcagtagcagtgtctcaaaaagcaggcggaaggcccatttccccagc
agcagcaatgaaaaggaaaatctcatctcatggattcctgagaacatccggaagaaagag
tgcacctactttgttgaaagctctcagacatcagattctgggagggtcgtgtgtgagtgt
ggctatctcagggaacagcacctggaagatgctgccaaacctcccatctccctgggaaag
gaatgggaccccagaacgcatatccgggaaatgccgacggatgccttcggtgatatccac
ttcagaggcctggggcagaagatggggaagtatgtacgcgtctcttcggatacccctcca
tgggtcatctaccacctcatgacacaccactggggcctcgatgcacccaacctgctcatc
tcagtcaccgggggagccaaaaacttcatcatgaagccaaggctgaagaacatcttccgg
caagggctagtcaaagtggcccagaccactggggcctggatcatcacaggggggtcccac
gctggcgtcatgaaacaggtgggagaggcagtgagagacttcattctgagctgcagccac
aaggagagcgagattgtcaccatcggcgtagccacctgggggaccgtgtacaaccgggag
agcctcatctggcccatgggtggctttcccgctgagtacgtactggatgaggagaaccaa
ggcagcctgtcatgcctggacagcaaccactcgcacttcatcctggtggatgatgggact
cacgggaggtatggagtggaaatccccctgagaaccagactggagaagttcatttcggag
cagaccaaggtgaaaggaggcgttgccatcaggatccccatcgtgtgcgtggtgctggaa
ggaggcccagggacacttgataccatctacaacgccatcaccaatgggaccccctgtgtg
atcgtggaaggatctgggcgcgtggccgatgtcattgcacaagtggccagcctgcctgtg
cccaagataaccattgccttgatccagaagaagctgagcgtgttcttccgtgacacctat
gagcaattcactgagggcaaagtggtggagtggaccaagaagatccaagacatagtgcgg
agccggcagctcctgaccattttcagagagggcaaatatggccagcaggacgtggatgtg
gccatccttcaggccctgttcaaagcatcccggaaccaggacaactttggttgtgagaac
tgggactaccagctgaagttagctgtggcctggaacagggtggacattgctcggagcgag
atcttcacagatgaccacgagtggaagcccacagatctgcaccccgtgatggcggctgcc
ctgatctccaacaagccagagtttgtgaagctgttcctggagcagggagtgcgcctcaag
gagtttgtcacctgggacaccctggtttacctctacgacaacatggcaccctcctgcctg
ttccacagcaagctgcagaaggtcctgctggaggagagagagcacatggctggctccaaa
atgccaagaatccaactgcaccatgtctcccaggtgctgcgggagctgctgggctgctcc
acacagcctctctaccccaagcccaagcacacagagcggccccggccctccatccctgtc
ccacacatcaatctgaatgtccagagctcaagtctccggtccctctacaagcgctctgct
ggccgagccaccttcaccatggacccagtccgcgacctgcttatctgggctgtggtccag
aaccgcaagcagctggcagaaatcatctgggcccagagccaggactgcatggcggccgcg
ctggcctgcagcaaaatcctgaaggagctggccaaggaggaggaagacaccgacaccact
gaggacatgctggccctggctgagcagtacgagcaaaaggcgatgggcgtgttcacagac
tgctaccgcaaggatgaagagagagcccagaagcttctcacccgtgtctctgaggcctgg
gggaagacaacctgtctgcagttggcattggaggccaagaacatgaattttgtgtcccat
gggggtgtccaggcctttctaaccaaagtctggtgggggcagatgtgtgtggacaacggg
ctttggcaggttattgcatgcacattgttcttcccacttctctacactggcctcatcacc
ttcagggagaagaggctgcagccgatgggctgcatgacacggctccgagccttcttcaca
gcgcctgtcgtcatcttctacatgaacatcctctcttacttcacctttctcctgctcttt
gcctacgtcctgatggttgacttccagccggtgccatcctggtgggagtacctcctctac
ttctggctcttctccctggtgtgtgaggagacccgccagctgttgtatgatccagatggg
tttggggttgtgaaaatggcttccctgtacttcaaggacttctggaataggttggatatc
tgtgccattctagtctttatcacagggctgacttgcaggctgatcccatcaactttatat
cccgggcgcatcatactgtcactggcttttatcattttctgcctgcgtctgatgcacatt
ttcactgtcagtaaaacgctggggcccaagatcatcattgtgaagcgcatgatgaaggat
gtcttcttcttcctcttcctgctagcagtatgggtcgtgtcctttggggtggccaagcag
gccatcctgattcacaacgaggagcgtgtggagtggcttttccgtggcgtggtctaccac
tcctacctgaccatctttgggcagattccctcctacatcgatggcgtgaacttcaacatt
gaccagtgcagccccaatgggactgacccctacaagcccaagtgcccagagacaaatgaa
gacaacaagaaacccatcttcccagactggctgacagtcatcttactgtgcctgtacttg
ctcttcaccaacatcctcctcctcaacctcctcatcgccatgttcaactacaccttccag
caggtccaacagcacacagaccagatctggaagttccagcggcatgacttgattgaggag
taccacggccgcccgcctgcgcctccacccttcatcctcctcaaccacctgcagatcctg
gtccagcggggcttgctccacaggccggccaccagccacaggcagctcaaagagaagctg
gagaagaatgaagaagctgccctcctctcttgggagatgtacctgaaggagagctacctg
cagaaccagcagtgccgggagaagcagaacacagagcaaaagatccgagacattgcacag
agggtggacatgctggcagacctgctagacttggaccgggtgaagaggacagggctggtg
gagtggagactgatctctctggaagaccaggtacatcagagcgcccaggccctcaggtgg
ataatgcaggcgctgcaggacaatggattcagcgcaggagaggatgtgccatctgtgggc
tcgggcaaagccttggagacaaaggaggttggcctggaggggaaaccagaagagagccag
tcaccgtaccatgtgcttgcccgaaacctcctgtacccagggtctcacacccgccgcttc
cctgtgccagatgagaaggtgccctgggaggtggactttgcgctctacgaccctcccact
tactctgctgagcacaaggacatggctgtgcaggacccgttcagcctctccttggagtct
ctcctgaagatcaactacaacaccatggatgggctgattgaccggcagagcttccacggc
ctctacattgtgcaggatgggctgcccctgaaccccatgggcaggacgggcctgcgaggc
cgagggaggctgcactgctttggtcccaaccatgccctgcaccctatcgtgactcgatgg
aggaggaatttggatgggtccattataaggaagagcctgaagaagatgctggaagtcctt
gtagcccagtacccactgtcagatgtctgggctctgcctggggggtcactggagccaggt
gagacgctgccactaaagctgaagtggatcctgcgccgggagttctggccccagttccag
aacttgctgaaacaaggcactgaggtacacaaggggtaccttgacgacccccgcaacacg
gataacgcctgggttgagacggtcgctgtcagcgtgcacttcaacagccagaacgacgtg
gagatgaagcggctgaactcgttccttcagggctgcgatccggagctgtgcatccgctgg
caggtgctggacaagaggatccctctgcacgccaaccacaagaagttcttgcacaagatc
tcaaccctccttgatgcctactattga
DBGET
integrated database retrieval system
