Strigops habroptila (Kakapo): 115613118
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Entry
115613118 CDS
T08851
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5 isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shab01009
]
115613118 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115613118 (TRPC5)
Protein phosphatases and associated proteins [BR:
shab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115613118 (TRPC5)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115613118 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
115613118
NCBI-ProteinID:
XP_030354069
UniProt:
A0A672U484
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All DBs
Position
9:25461964..25559102
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AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGNDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDETNEDGAGEKPKAKSVSFNVANKKKDFNVSALIKTMSGIDMVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPNSEPMYTISDGIIQPHYMWKDIKYSQ
IDKEKAENCSKSEINLNEVDYSGNTRLTGQSKECPVVCTSSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtaaactactcaccgtacagagaccggatcccacta
cagatcgtgcgagcagaggcagagctctcggcggaggagaaggcctacctcagcgctgtg
gagaagggggactatgccagtgtgaaacatgccttgcaagaggcagagatctactacaac
atcaacattaactgtatggatcctcttggtcgcagtgcccttttaatagccatagagaat
gaaaatctggagatcatggagttacttttgagccacagtgtgtacgtgggagatgctctg
ctgtatgcaatacggaaagaggtggtgggagctgtggagctgctgctgaattacaggaag
ccaagtggtgaaaaacaggttccaactttgatgatggacacccagttttcagaattcact
ccagatatcaccccaataatgctggcggctcacaccaacaactatgaaatcatcaaactg
cttgtccaaagacgggtaacaattccacgcccgcaccagatcagatgcaactgtgtggaa
tgtgtctccagttcagaggtggacagcctgaggcattccaggtcaaggctgaacatctac
aaagccttagccagcccttcgttgattgccttatcaagtgaggaccccatcttgacggct
ttccgactgggctgggagctgaaggagctcagcaaggtggaaaatgaattcaaggctgaa
tatgaagagctttcacagcagtgcaagcgttttgctaaggaccttttggatcaagcacgg
agttccagagaattggagatcattctcaatcacagagatgatcaaagcgaagagctggat
ccccaaaaatgtcatgatttggcaaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccaaactgccagcagctactagcaacactctggtatgatggctttcca
ggatggaggcggaaacactgggcagtaaaactcttgacctgtgtcaccattggactgcta
tttcctgtgctatccgtggcatatctgattgcaccgaagagcaggctgggactgttcatt
aaaaagccatttataaagtttatttgccacaccggctcttacctaaccttcctcttcatg
ctcctactggcgtcacagcacattgtcaggactgaccttcacatgcagggaccacctcct
accatcgtggaatggatgatcctgccctgggttctaggttttatctggggagaaatcaag
gagatgtgggatggtggattcaatgagtacgtacatgactggtggaatctgatggatttt
gcaatgaactcactctaccttgcaactatctcccttaaaattgttgcctacgtcaagtat
aacggttctcgtccgagggaggagtgggagatgtggcacccgactctcattgcagaagcc
ctctttgcaatatccaacatcttaagttccttgcgtctcatatccctgtttacagcaaat
tcacacctgggacccttgcagatttctctgggacgcatgctgctagacatccttaaattc
ctttttatctactgtctggtgcttctggcttttgccaacggactgaaccagctttatttt
tactatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtcactcttctggtctgtgttt
ggtctgctcaatctctacgtcaccaacgtgaaagccagacatgagttcacagaatttgtt
ggggccactatgtttgggacctacaacgtcatctccctcgtcgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccatgcggatattgagtggaag
tttgcacggacgaagctctggatgagttactttgatgaaggtgccactctgcctcctcct
tttaacatcgtcccaagtcccaagtccgtctggtacctctgcaagtggattcacaatcag
ctgtgcccaggcaacgactctgacaacgaacagaagaggcatgaaaacctcaaaacattc
acagagcggcatgctgacaacttgatccagaatcaacattaccaggaagtgataagaaac
cttgtgaaaagatacgtcgcagcaatgataagaacttccaaaaccaacgaaggtttaact
gaagaaaacttcaaggagttaaaacaggacatctcaagttttcgctatgaagttcttgac
ctcttaggaaacaggaagccccagaggagaagttactctaccagcagcacggaggtgtcc
caaaaggatgaaacaaatgaggatggtgctggagaaaaacctaaagccaagagcgtgtct
ttcaatgtagccaacaaaaaaaaggacttcaatgtatctgctctaattaaaactatgtct
gggatcgatatggtggaagagaagccaaaaagcaacgggatcagtaaacgctccttcgtc
cggaatggaaatagagttcagagactttccagctccaagaaggagtcctttaagagactg
ggcctgcttttctccaagatgaatggacacgtccctgaaccaaactcagagcccatgtac
acgatttcagacggaattattcagccacactacatgtggaaagacattaaatattctcag
attgataaagagaaagcagagaattgttccaaaagtgaaattaacctcaatgaggtggac
tacagtgggaacacaagacttacaggacagagcaaggagtgccctgtggtttgtaccagc
tcccttcactgtgcttccagtatttgttcctctaattccaaacttatagactcgtcagag
gacgtgtttgattcatggggagaggcctgtgacttgtttataaaccagtggaaagatggg
caggaggatcacgtcacgactcggctataa
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