Strigops habroptila (Kakapo): 115614522
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Entry
115614522 CDS
T08851
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115614522 (RNF123)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115614522 (RNF123)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115614522 (RNF123)
Multi subunit type E3
KPC complex
115614522 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115614522
NCBI-ProteinID:
XP_030357368
LinkDB
All DBs
Position
11:20446993..20497932
Genome browser
AA seq
1308 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLSTAPEKSKVTGIVNSRLLNDYLHRVFTSADGNQPAAAYRKHLT
FQNLQEHLDRLLAEKSGSEDSRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYCPLQDPPVADLVKAHKLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLLCKVYLVEDVLMTFLLSILEQGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLTSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPATVSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANVVIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
TLAIGGALARPGWLSSPTLGRANRFLSTAAVSLMNPRRPLGALEKIKVRTLSVEQRTEED
IEGSHGNEGLLLGKPPEEPDQPITENSLLEVLDGIIMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDVY
WLLQVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADLL
SSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTITLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPG
LESVDHYPILVAVTGILVRLLVDTDAQGAERATAVLLADPCFQLRSIQYLLGHAEPSALA
ATAPATDKRHFSLHTYTDYISTEELVKVDKMLSHLSEESKQAAATTLPTSEEDLCPICYA
HPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgagaggagccgggactgctttctcgaggaagaactacaggctgagcaccgcg
ccagagaagtccaaggtcacagggatcgtgaacagtaggctgctgaatgattatctgcat
cgtgtctttaccagtgctgatgggaaccagcctgcagctgcttacagaaagcacctgacg
ttccaaaacctgcaggagcaccttgaccggttactagcagagaagagtggctctgaagac
agtcgagaccaggtagcagagggccggcttggtccctctactgtggtgttggaccacaca
agcggttttgaggggctcctgctggtggatgatgacttacttggggtgattggccacagt
aactttgggtccatcagggccacgacgtgcgtgtataaagggaaatggatttacgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggagttggagatacaccagattcatatgcatatgatggaaacagggtgcgg
aagtggaacgttactactaccaactatggcaaatcttgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaacggcatatctctgggg
actgcttttgataacatcacgagaggtgctggaatggcttacttccctgccatcagcctc
tcattcaaagagtctgtggcttttaactttggaagccgtccactccgttatccagtggaa
ggttactgccctttgcaagatcctcctgttgcagacctagtgaaggctcacaagctgcta
ggctacttgaagaatgtgatccatattggaatagatgtgacagaggggaagctggtggag
aaggacacgtccatgtggcagctgcagggagaacccacagtgctgattacattagcccac
atattcaattatttctcccctcttctgtgcaaggtgtatctggtggaagatgtgctcatg
accttcctgttgagcatccttgagcaaggaggggcagtggaggcccatccccttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcacgagtgcctcaag
cagctactgacgtccctgctgcgggcttacaggttctcccccatcatcccagacctggga
ttacaaattcactacctccggctcaccatagcagtcttgaagcatgagaaatccagaaaa
tacttactcagcaatgttctcttcgatgtgctccgttctgttgtgttcttctacattaag
agcccgctgcgtgtggaggaggctggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggagagtgctgaggag
aggctgaggcggcgggcatatgaaagaggctgccagcggctcaagaaacgcattgaagtg
gtggaaggtctccaggttcagattctgaagctgctgctgaacaacaaggacagaggagga
ggggaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggaaaacgct
agcaatagagggaacttgactgtgttgtgcccaccagagtacatggtgtgcttcctgcac
cgccttattgctgccctgcgtttcttctgggatggccacaaggcgaaaaccccggccaca
gtgagcagtgaagaggcgtatgtccctcctcaactcttctataatggcaaggtggattat
tttgaccttcagcgacttggaggtctcctgtctcatcttaagaagactctgaaagatgac
ctggctgcaaaagccaatgtcgtgattgaccctgcggagctgcaggcagtgactatggac
gatctcgatgaagatgaggaatcagcaacatcagcagcacaatctcagcgtccctctgcc
accctggccattggaggagctcttgccagacctggctggctcagctcccccactttgggc
cgtgccaaccgcttcctcagcacagcagccgtcagcctgatgaacccgcggcggcctctt
ggagctctggagaagatcaaagtgcgcacactaagtgtggagcagcgcacagaggaggac
attgaaggcagccatggaaacgagggtctcttactgggcaaacccccagaggagccagat
cagcccatcacagagaactccctcctggaagtcctggatgggataatcatgatgtacaac
ctcagtgtccaccagcagcttgggaagatggttggtgtgtcagatgatgtgaatgaatat
gccatggcactgaaagacacagaggaaaaaatcagccgctgcccaaagaggaggagagac
atccatgaggaactgctgaagagccaaaaggttttctctgagaagctgaatcacctaagc
cgacgccttgcttggataaatgtcaccatttattcaaaggaaaagatgcaggatgtatat
tggctgctgcaagtgtgcatccgcaccattgagcacggtgacaggacaggctcacttttc
gctttcatgccggagttctacctcagtgtggctatgaacagctacagcgcactcaagaac
tactttagccctgtaaacagcatggaggaacttccaggctacgaggagaccctgatgcgc
ctcgctgccatcctggccaagcattttgctgactcaaggattgtgggcacagacatccgg
gactccctgatgcaggcgttggccagctacgtctgctaccctcactcgctgcgtgctgta
gagaggatcccagaagagcagcggatctcaatgatgaagaacctcctggctccctatgag
cagcgaccctgggcacagaccaactggatcctcgtcaggctgtggcggggctgtggcttt
gggtacagatacacacggcttccacacctgttgaaaaccaagcctgaggatgccagcctc
cccagcctgcagaagccatgtccctccaccttgctgcagcggcacatggcagatctgctc
agcagtgaccgtgacctggcccccagcttcctcaacagtgtcctcaaccagctgaactgg
gctttctctgagttcatcggcatgattcaggagatccagcaggcagcagagcgcttggag
aggaactttgtggacagccgccagctgaaagtgtgtgctacctgctttgacctgtcagtg
agcttgctcagggtgctggagatgaccatcacgctggcgccagagatcttccttgactgg
aatcgcccatcatcagagctgctgcttcggaggcttgcccagctcttgaaccaggtgctg
aaccgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgccaggg
ctggagagcgtggaccattacccaatccttgtggccgtgacggggatactggtccggctg
cttgtggacactgatgctcaaggggccgagcgtgcgacggcagtgctgctggcggacccc
tgcttccagctgcgctccatccagtacctgctgggccacgccgagccctctgccttggca
gccactgccccggccactgacaagcggcatttctccctacacacctacacagattatatc
agtactgaggagttggtgaaggtggacaagatgctgagccacctgagcgaggagtccaag
caggcagctgccaccacactgcccaccagcgaggaagacttgtgccctatctgctacgca
caccccatctcagccatcttcagaccttgttcccacaagtcgtgcaaagcctgcatcaac
cagcacctgatgaacaacaaggactgcttcttctgcaaggccaccatcacaggggtggac
gacttcaccaagccagccagctcgtag
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