Strigops habroptila (Kakapo): 115614868
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Entry
115614868 CDS
T08851
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115614868 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shab01007
]
115614868 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115614868 (IARS1)
Enzymes [BR:
shab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
115614868 (IARS1)
Amino acid related enzymes [BR:
shab01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115614868 (IARS1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115614868 (IARS1)
Prokaryotic type
Other AARSs
115614868 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
115614868
NCBI-ProteinID:
XP_030358137
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All DBs
Position
11:complement(20000892..20115123)
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPNEEEKILELWKNLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQC
RGIVMRYSKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPAVTVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDSATGKIYILMESRLIALYKSDSEYEVLDRFPGIALKGKKYKPLFEYFIQYK
DKGAFAVVVDSYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPICPVDASGCFTA
EVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSVAELEELSGVKVTDLHRESIDHLTIPSHCGKGLLHRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMSIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALESIRSLEKYVLEELNVRQVTLSTNKEKYGVRLRAEPDHM
VLGKRLKGAFKLVMAAIKELKSEQLEEFQEAGTIVVEGHELHGEDLRLMYQVAGGSAQFE
AHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRAHPEGDYL
DTVIKEHTDFIFATIKAALKPYPVPTSKEVLIQETTQLKGSELEITLVRGGLCQDVGPAC
AYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNSKLTVFNGKTELLN
KTDLLSLSGKTLHVTAGAAPALPSSAEALLCQYINLQLVNAKPQECQKGTVGTLLMENPV
GKNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTQEITKDISMKNLNTKTVYVHVIPTTA
EC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacataaactttccaaacgaggaagagaagatactggag
ctatggaaaaatcttaattgtttccaggaatgcctaaagcaatcaaagaacagacctaga
tttaatttctacgatgggcctccatttgcgactgggcttccacactacggccatatcctt
gcaggaaccattaaagacatagtgaccagatttgctcatcagagtggttttcatgttgac
agaagatttggctgggattgccatggcttacctgtggaatatgagattgacaagacctta
ggcattaaagggccagaggatgtagcaaaaatggggattgaagaatacaacaatcagtgc
agaggaattgtgatgagatactcaaaggaatgggagttcagtgttaccagattaggacgc
tggattgactttgaaaatgactataaaactctttatcccgagttcatggagtctgtttgg
tgggttttcaagcaactgtatgacaaaggactggtgtatagaggtgttaaggtcatgcct
ttttcaactgcatgcaacaccccactgtcaaactttgagtcccatcagaattacaaggat
gttcaagatcctgcagtgactgtgagcttcccactggatgaagatacaaatgtttctctt
gttgcttggaccactactccttggaccttgcctagtaacttggccctttgcgttaatccg
gaattgcaatatgttaagttgagagatagtgccacgggaaagatctacattttgatggaa
tccaggctgatagcactgtacaaatctgacagtgaatatgaggtacttgacaggtttcct
ggcattgctcttaaaggcaagaaatataaaccactctttgagtattttattcagtacaaa
gataaaggtgcctttgctgtggtggtagacagttatgtgaaggaggaggaaggcacaggt
gttgtacatcaggccccctattttggtgctgatgattacagagtctgcatggattttaat
atcatccagaaagattctgtgcccatttgtcctgttgatgcatcaggctgcttcacagca
gaagtgactgactttgctggacagtatgtgaaggatgcagataagaacatcattaaatta
ctgaaagagaaaggcagactggttcacagcagtagttttaagcacagctatcctttctgc
tggaggtcagatactcccttgatatacaaagctgtgccaagctggtttgtaagagtggag
cacatggtggagaaactactggagaataatgcccagtgctactgggttccagattttgtg
agggagaagcgttttgggaactggcttaaagacgcacgagattgggctatatctaggaac
cggtactggggaacacccatccctctgtgggtcagtgatgattttgaggaggtagtttgt
gttggttcagtggcagaattggaagagctatctggagtgaaagtcactgacctccatcga
gaaagtattgatcacctaacaatcccgtcacactgtggcaagggcttactgcaccgcgtc
cctgaagtttttgattgctggtttgagagtggaagcatgccttatgcacaagtccattat
ccatttgaaaacaaaaaagaacttgaagatgctttccctgctgacttcattgctgaaggc
attgaccaaacccgaggatggttctacacgttgctggtgctgtccactgctctttttgga
aggcctcctttcaagaatgtaattgtgaatggccttgttcttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattacccagatccaatgagtattgtaaatagttatggagct
gatgcactaaggttatacctgatcaattctcctgtggtaagagcagaaaacttgagattt
aaagaggaaggagtaagggatatactgaaggatgtcttcctgccctggtacaatgcatat
cgctttcttgttcagaatgttcagatcctgcaacataaggatgagggacgagaattcctt
tacaatgagaatacagttaaggagagcaataacatcatggataaatggattctttctttc
acccaatcactcattcagttcttcaaagctgaaatggcagcttaccggctgtacactgta
gtccctcgattagtgaagtttgttgatattctgaccaactggtatgttagaatgaatcgc
agaagactaaagggcgagaatgggactgaagactgcattatggccttggaaaccttgttt
agtgtgttgttctccatgtgcagacttatggcaccgtatactccatttatcactgagctg
atgtaccagaatctgaagacacttattgatccagcctcagttcaggaaaagaatactgaa
agcatccactacctcatgcttccccaagtgagggaggatctcatcgacaaaaaaattgaa
agtgccgtttcttgtttgcagtctgttattgagcttggacgagtaatcagggacagaaag
accattccagtaaagtatcctttgaaagaagtagttgttatccatcaagatccagaggct
ctggaaagcatcagatctttagagaagtacgtacttgaggaacttaatgtacgtcaagtg
acactatctactaataaagagaaatacggagtccggctcagagcagaaccagatcacatg
gtgcttgggaagcgcttgaaaggtgcatttaagcttgtcatggctgcaatcaaagagctg
aagagcgagcagctggaggaattccaggaggcaggcaccattgttgtagaaggacatgaa
ctccacggggaagatcttcgtctcatgtatcaggttgcaggaggatctgcacagtttgag
gcacattctgatgctcaggttttagttctgctagatgttaccccagaccagtccatggtg
gatgaaggagttgcacgggaagtgattaatcgcatccagaagcttcgcaaaaagcgaaat
ctggttcctacagatgagattacagtgtactacagggcacatccagaaggtgactacctg
gatactgttattaaggaacatacagatttcatttttgcaacaataaaggctgccctgaag
ccttacccggtgcctacctcaaaagaagttcttatccaggaaacaacccaactgaaggga
tcagagctagaaattacacttgtcagaggtggtttgtgtcaggatgttggtccagcctgt
gcctacgtcaacctcaaagtttgtgttaatgggacagaacaagatggtgtgttgctgctg
gaaaatccaaaaggagataataccttgaacttcaccgggcttgtagatgctgtctcctgc
atttttggtcttaaaaattcaaaactgacagtttttaatggaaaaacagaactgctaaac
aaaactgacttgctgagtctcagcggaaagactctgcatgtgacagcaggggcagcgcct
gccctgcccagctctgccgaggctctcctctgccagtacatcaacttgcagctagtgaat
gcaaagccacaagaatgtcagaaaggaacagtgggaactcttctaatggaaaaccctgtt
gggaagaatggattgacataccaaggtctcttacatgaaacagcaaaagtctttgggctc
agaagcaggaggctaaaattgttcctggatgaagcgcaaactcaggagatcacaaaggac
atctccatgaagaacttgaacacgaagaccgtgtatgttcatgttatacccaccacagct
gaatgttga
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integrated database retrieval system
