Strigops habroptila (Kakapo): 115617029
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Entry
115617029 CDS
T08851
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115617029 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
shab04050
]
115617029 (TNFRSF11A)
04090 CD molecules [BR:
shab04090
]
115617029 (TNFRSF11A)
Cytokine receptors [BR:
shab04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115617029 (TNFRSF11A)
CD molecules [BR:
shab04090
]
Proteins
115617029 (TNFRSF11A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
FixS
AI-2E_transport
CrgA
Motif
Other DBs
NCBI-GeneID:
115617029
NCBI-ProteinID:
XP_030362908
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Position
1:83774931..83803728
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AA seq
667 aa
AA seq
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MPVPSGCWLLLLCLAAAGKQLSLQITPLCESEQHYEYSGRCCTKCEPGKYMSARCTATSD
TVCQPCGPNEYMDVWNEEDKCLLHKICDQGKALREVNPGNSTFQRQCACTMGYHWNEDCD
CCLRNTICAPGFGVEHPVQQDQDTMCIPCPRGYFSKVASSTDQCKSWTNCTALGMAEVVP
GTEKSDAVCAERTMPEPSEDGTNRILYVLIVISFLVALIGIVIFIVYYKNKGKKLTADLQ
NWANEVCSQIKGTKEPPRDTSVTMNIMNVVVPQTYEGMCPLGPTGSPAPGNSCCTSGQAP
CRNGSPSTAPCEAGGSLQEFSVVTETDDDHFPPVPTEDEYTDKDLNTADYLPLLSRTASK
TVSSFSEPMEAGENDSLNQYFSGIGSTEDISVSQGFHPFTDGAHTATDKLLQKSCQHAHS
CLKETGNKDTDRCATNSDSEKICVRCGISYRESPRKWRKPSCTAADSASTSPETGSYAQC
TCGLNFLSAGQSTLASDGGMEDASSDSTNMKYQNTSRSTSGTNRNTSGTNSSTSDLPPAS
GNVTGNSNSTFISSGQVMNFKGDIIVVYLSQNSQEGATASGPSEENVGSPVQEENLSRCE
TFAGNAQHYKEKCAELQQGSCPAAGSGGPRWPAGPLCQEQSPSCRGQALRPVQEEGKLGH
FSEKVLN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcccgtcaggctgctggctccttctcctgtgcctcgctgctgctggcaagcag
ctgtcactacaaattactccgctgtgtgaaagtgaacaacactatgaatactctggacgg
tgctgcacaaaatgtgagccaggaaagtatatgtctgctagatgcactgctacttctgat
actgtgtgccagccgtgtggcccaaacgagtacatggatgtctggaatgaagaagataaa
tgcttactacataaaatatgtgatcaagggaaagctttgagagaagtgaacccagggaac
agcacgttccagaggcagtgtgcttgtacgatgggctaccactggaatgaagactgcgac
tgctgtctgcgaaatactatatgtgctccaggatttggagtcgagcatcctgtgcaacaa
gaccaggacacaatgtgtataccatgtcccagaggttacttctcaaaggtcgcttcatct
actgatcagtgtaaatcctggaccaactgtacagctctaggaatggcagaagtggtgcct
gggactgagaagtcagatgcagtttgtgcagaacggacgatgcccgagccatcagaagat
ggaacaaaccggatcttatatgtgttgattgtcatctcatttcttgtggcactaattggc
attgtcatcttcatcgtatactacaaaaataaggggaaaaagctgacagcagatctacag
aattgggctaacgaagtgtgcagccaaataaaaggcacaaaggagccccccagagataca
tctgttaccatgaacatcatgaatgttgttgtcccccagacctatgaaggcatgtgcccc
ctgggccccactggctctcctgcccctggaaactcatgctgcaccagtggacaagctcct
tgcaggaatgggagccccagcacagcaccctgtgaggcgggagggagcctccaagagttt
tctgtggtaactgagactgatgatgaccatttcccaccagttcccacagaagatgaatac
acggataaggatctcaataccgctgattatttacccttactgagccggactgccagtaaa
accgtgtcgtcattttcagaaccgatggaggcaggggagaatgacagcttaaatcagtac
ttttcagggattgggagcacagaggatatatcagtctctcaaggctttcaccctttcaca
gatggggcacacactgccacggacaaacttcttcagaaatcttgccaacatgcccacagt
tgcctgaaggaaacgggcaacaaagacacagatcgttgtgcaacaaactctgactcagag
aagatctgtgtgaggtgtggcatttcgtacagggaatctcccagaaagtggagaaaaccc
tcctgtactgcagctgacagtgcctccacctccccagaaactggatcctatgcacagtgc
acctgtggcttgaattttctctctgctggtcagagcacgctagcaagtgatggtggtatg
gaagatgcatcttcagatagtaccaacatgaagtaccagaacacaagcagaagcacttca
gggacaaacagaaacacttcagggacaaacagcagcacttcagacctccctccagcttct
ggaaatgtgactggaaacagtaactccacttttatctcaagcggacaagtaatgaacttc
aagggcgacatcattgttgtctaccttagccagaactcccaggagggtgccacggcctcg
gggccaagcgaagagaatgtgggcagcccggtgcaggaggaaaacctgagccgctgcgag
acgtttgccggcaatgcccagcactacaaggagaagtgcgcggagctgcagcagggctcc
tgcccggccgcagggagcggggggccgcggtggccggccggacccctgtgccaggagcag
agcccgtcctgccgcgggcaggccttgcggcccgtgcaggaggaggggaagctgggacac
ttctcggagaaggtgttgaactga
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