Strigops habroptila (Kakapo): 115617819
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Entry
115617819 CDS
T08851
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115617819 (SCN4A)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115617819 (SCN4A)
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
115617819
NCBI-ProteinID:
XP_030364637
LinkDB
All DBs
Position
19:complement(842325..872731)
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AA seq
1844 aa
AA seq
DB search
MAGLPPIPGIENLRPFTPASLAAIEQRIAEAEALRIKRQHVELPEEEELKPRSDLEAGKN
LPLIYGDPPLELIGIPLEDLDPFYKDKKTFIVLNKGKSIYRFSATPALYLLGPFHPIRKG
AIKVLIHSYPCPLCFKLFSMVIMITILTNCVFMTMSNPPTWSKNVEYTFTGIYTFESLIK
VLSRGFCINDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPG
LKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLEDLG
LDNDTMANATLYGNFTDDMASNFTSNSTFDFEAYISDEANFYFLEGALDALLCGNSSDAG
KCPEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFF
VVVIFLGSFYLINLILAVVAMAYAEQNDATLLEEQQKEEEFQQLMEQLKKQQEEQEKMLQ
DRRSSSSSPPSSVVEKERDSDLNSDQDKAKDCNGQVIPKVVLQRSATVVGFNPANDPEKP
DHNHLAADNLDVPGLEKRVGSAASVLSNAVEELEEAHQKCPPWWYKCAHTFLVWNCCLPW
RKLKEFVKLVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFENVLTVGNLVFTGIFMAE
MVLKLIALDPYQYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHM
NDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSS
FSADSLAASDDDGEMNNLQIAIGRITRGIDFVKTSVITLLRRLWKGKKVAPEEEQEPNKT
DNSVLNHVDTGQDPKSEYLDGVTGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLYEE
TSTQSDTEDAKNPLSSDNASSFCSTVDYKPPEPEEEEVAEEAEESNEPEECFTEACVKRF
PCLYVDITSDRGRTWWNLRKACFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIR
TILEYADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSEL
GAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYRCINTTTGDLFDISVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVAT
FKGWMDIMYAAVDSRKTEEQPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQK
KKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMAYTLVTKQVFDIVIMIL
ICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRQYFFTIGWNIFDFV
VVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLL
SPILNSGPPDCDPDLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFS
VATEESSEPLCEDDFEMFYEIWEKFDPDATQFIAYSALSDFVDTLQEPLRIPKPNKIKLV
TMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTL
KRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALTEDAPEKEGLIATKMHEMY
GNSGTDVETAPAFGLEPVPGSETQDAPEEAKARDKERVVKESLV
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgccgatcccgggcattgagaacctgcgccccttcacacccgcctcg
ctggctgccatcgagcagcgcatcgccgaggccgaggcgctccggataaagaggcagcac
gtggagctgcctgaggaagaagagctcaaacccaggagtgacctggaagctgggaagaac
ttgcccctcatctatggtgacccacccctggagctcatcgggatcccgctggaggacctg
gacccgttctacaaggataagaagacattcatagtcctcaacaaagggaagtctatctac
cgcttctctgcaactcctgccctctacctgctggggcccttccaccccatccgcaaagga
gccatcaaagtgcttatccattcatatccttgccctctgtgctttaaattattcagcatg
gtcatcatgatcacgattttaaccaactgtgtgtttatgacgatgagcaaccccccaaca
tggtccaagaatgtggaatacaccttcactgggatatacacctttgagtccctcatcaag
gtactgtcaagaggcttctgcatcaatgacttcacattcctgcgcgacccgtggaattgg
ctggacttcatggtcatctccatggcctacattaccgagttcgtggacctggggaacatc
tctgctctcagaaccttccgtgtcctccgtgccttgaaaaccatcaccgtcataccaggg
ctgaagacgattgttggggctctgatccagtcggtgaagaagctctcggacgttatgatc
ctcactgtcttctgcctgagtgtgttcgccctcatcggcctccagctcttcatgggcaac
ctccggcagaagtgtgtgcggtggccacccctcaatgacaccctgctggaggacttgggg
ctagacaacgacacgatggccaacgcaacgctctatggcaacttcactgatgacatggcc
agcaacttcaccagcaacagcacctttgatttcgaggcctatatcagtgatgaagccaat
ttctacttcctggagggagcgcttgacgccctgctctgtgggaacagcagtgatgctggg
aagtgccctgaagggtaccagtgcatgaaggcggggaggaacccaaactacggctacacc
agctacgacaccttcagctgggctttcctggccctcttccgcctcatgacgcaggacttc
tgggagaacctcttccagctgacactgcgtgcagcagggaaaacgtacatgatcttcttc
gtggtggttatattccttggttccttctacctcatcaacctcatcctcgcggtggtggcc
atggcttacgcggaacagaatgatgccacgctgctggaggagcagcagaaggaggaggaa
ttccagcagctcatggagcagctgaagaagcaacaagaggagcaagagaagatgttgcag
gaccggcggtccagcagcagttccccgcccagcagcgtggtcgagaaggagcgagactcg
gacctcaacagtgaccaggacaaggcaaaggactgcaacgggcaagtgatccccaaggtc
gtgctgcagcgctctgctacggtggttggtttcaacccagccaatgacccggagaaacct
gaccacaaccacctcgctgcagacaacctagatgtgccaggccttgagaagagggtgggg
agtgccgccagtgtcctctccaacgctgtggaagagctggaggaagctcaccagaagtgc
ccgccctggtggtataaatgtgcccacacgttcctggtgtggaactgctgtcttccgtgg
cgcaagctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctgggcatc
accatctgcattgtgctcaacacagtcttcatggccatggagcattaccccatgacagag
gagtttgagaatgtgctgactgttgggaacctggtcttcacagggatcttcatggcagag
atggttctgaagctcattgctctggacccctaccagtatttccagcagggctggaacatc
tttgacagcatcatcgtcaccctgagcctggtggagctgggcctggccaacgtgcaaggg
ctgtctgtgctccgctccttccgcttgctgagggttttcaagcttgccaagtcctggccc
accctcaacatgctcatcaagatcattggcaactcggtgggtgccctggggaacctcacg
ctggtgctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttgggaag
agctacatcgagtgtgtgtgtaagatctccgtggactgcacgctgccccgctggcacatg
aacgacttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgag
accatgtgggactgcatggaggtggctggccagaccatgtgcctcatcgtcttcatgatg
gtcatggtcatcgggaacctcgtggttctgaacctgttcttggctctgctgctgagctcc
ttcagtgctgacagcctggcagcatccgacgacgatggggagatgaacaacctgcaaatt
gctattggcaggatcaccaggggaattgactttgtaaagacctctgtcatcacgctgcta
cgcaggctgtggaaggggaagaaggtggccccggaggaagagcaagagcccaataagacg
gacaactctgtgttaaaccacgtggacactggccaggatcccaagtcggagtacctggat
ggagtcactggcaaagagcactttttcatggatgaactggaccacatgaatttcattaac
aatcccaacctgacggtgcaggtccccattgcctctgaggagtctgacctctacgaggag
accagcacccagtccgacaccgaggatgccaagaatcctctctccagtgacaacgcatca
tccttctgcagcacggtggattacaagcccccggagccagaggaggaggaggtggcagaa
gaggctgaggagagcaacgagcccgaggagtgcttcactgaagcctgcgtgaagaggttt
ccctgcctctatgtggacatcaccagtgacagaggtaggacatggtggaacctccggaaa
gcctgcttccgcattgtggaacacgactggttcgagaccttcatcgtcttcatgatcctc
ctcagcagcggggcactggcttttgaggacatctacattgaacaacgaaaggtgatacgc
accatcctggagtacgctgacaaggtcttctcctacgtctttgtcattgagatgttgctc
aagtgggtggcctatggcttcaaggtgtacttcaccaacgcgtggtgctggctggatttc
ctcattgtcgatgtttccattatcagcctgacagcgaactggctgggatactctgagctg
ggagccatcaagtcactgcggacgctgagggctctgagaccactgcgtgcgctgtccaga
tttgaaggcatgagggtggtggtgaatgccttgctgggcgccatcccctccatcatgaac
gtcctgctggtctgcctcatcttctggctgatattcagcattatgggggtgaacctcttt
gcggggaaatactaccgctgcatcaacaccaccacgggggacctctttgacatcagtgtc
gtgaacaataagagcgactgcatggccctcctccacactaacgaggtcagatgggtcaat
gtcaaggtcaacttcgacaacgtgggcttgggatacctctccttgctgcaggtggcaacc
ttcaagggctggatggacatcatgtatgccgctgtggactcacgcaagactgaagagcag
ccagtgtatgagatcaacctctacatgtacatctactttgtcatcttcatcatcttcggc
gccttcttcaccctgaacctcttcatcggcgtcatcattgacaacttcaaccagcagaag
aaaaagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactataatgcc
atgaagaagctcggctccaagaaaccccagaagcctatccccaggccagcgaacaagttt
caagggatggcatatacccttgttaccaagcaagtgtttgacatagtcatcatgatcctg
atttgtcttaacatggtgaccatgatggttgaaacagatgatcaaagtgaactcaaaaca
tctgttctctacaagataaatctggtcttcatcgtcatcttcaccggagagtgcgtgctc
aaaatgtttgccttgcgtcagtacttcttcactattggctggaacatctttgactttgtg
gtcgtcatcctttccatcttaggtattgtcctctcagacatcatagagaagtatttcgtg
tcacccactctcttcagggtcatcaggctggcaagaattggccgcgtcctccgcctgatc
cgaggggcgaaaggcatccggactctcctctttgctctgatgatgtccctgcctgccctg
ttcaacatcggcctcctgcttttccttgtcatgttcatctactccatctttgggatgtcc
aactttgcctatgtaaagaaggaggcggggatcgatgacatcttcaactttgaaactttt
gggaacagcatcatctgcctcttccagatcaccacgtcagcgggatgggatggcctcctc
agcccgatcctcaacagcggcccccctgactgcgaccctgacctggaaaaccctggcagc
tcagtgaaaggggactgcggcaacccatccatcggcatcttcttcttctgcagctacatc
atcatctcctttcttatcgtggtgaacatgtacatcgccatcatcctggagaacttcagt
gtggccacagaggagagcagtgaacccctctgtgaagatgattttgaaatgttttatgaa
atctgggagaagtttgatcctgatgccacccagttcattgcatacagcgccttgtctgac
tttgtagacaccttacaggagccactcagaattcctaagccgaacaagatcaagctagtc
accatggatctacctatggttgctggggacaaaatccactgtctggatatcctctttgcc
ctaactaaggaagtgctgggagactcgggagagatggatgccttgaaggccaccatggag
gagaagttcatggccgcaaacccttcaaaggtctcctatgagcccatcaccaccactctg
aaaaggaagcacgaggaagtctgtgctacaaaaatccagagggctttccggaggtacctc
ctgaggcgctcggtgaagcaggcatcctacatgtacaggcacagtaaggacgaggatgcc
ttgacagaggatgcacctgagaaggaaggtctgattgccaccaaaatgcacgagatgtat
gggaacagtgggacagacgtggagacagctcctgcctttggtctggagcccgttcccggc
tcagagacacaagatgctcccgaagaagcaaaagcacgggataaggaacgtgttgtgaaa
gagtcgctggtgtaa
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integrated database retrieval system
