Strigops habroptila (Kakapo): 115619032
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Entry
115619032 CDS
T08851
Name
(RefSeq) LOW QUALITY PROTEIN: 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
115619032
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115619032
Enzymes [BR:
shab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
115619032
Peptidases and inhibitors [BR:
shab01002
]
Metallo peptidases
Family M10
115619032
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
115619032
NCBI-ProteinID:
XP_030366907
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Position
W:complement(24638492..24669505)
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AA seq
591 aa
AA seq
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MKTHSVCGFIFKVLLIQAYLFNKILAAPSPIIKFPGDSTPKTDKELAVQYLNKYYGCPKD
NCNLFVLKDTLKKMQKFFGLPETGDLDQNTIETMKKPRCGNPDVANYNFFPRKPKWEKNH
ITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYP
FDGKDGLLAHAFAPGPGIGGDSHFDDDELWTLGEGQVVRVKYGNADAEYCKFPFWFNGKE
YNSCTDAGRSDGFLWCSTTKDFDTDGKYGFCPHESLFTMGGNGEGQPCKFPFKFQGQSYD
QCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFIFLGNKYESC
TSAGRNDGKLWCASTSSYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAP
IYTYTKNFRLSQDDIKGIQELYEVSTDVEPGPGPGSGPRPTLGPVTPELCKHDIVFDGVA
QIRGETFFFKDRFMWRTVYPRGNPTGPLLVSTFWPDLPEKIDAVYEAPQDEKAVFFFRKR
VLGYSASNLDXGYPKKLTNLGLTPGCATFDAAFNWGRNQEQYIFAGDRYWK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcacagtgtctgtggcttcatttttaaagtactattaatccaagcgtatctt
tttaacaaaattttagctgcaccgtcaccaatcattaagtttcctggagacagcactccc
aaaacagacaaagaactagcagtgcaatacctgaataaatactatgggtgcccaaaagac
aattgcaatttatttgtcctgaaagatactttgaagaaaatgcagaaattttttgggctg
cctgaaacaggtgatttggatcaaaacactattgagacaatgaagaaacctcgctgtggt
aaccctgatgtagccaattacaacttctttccaagaaagccaaaatgggagaagaatcat
ataacatacaggattataggttataccccagatttggatcctgagacagtagatgatgcc
tttgctcgagcctttcaagtctggagtgatgtcacgccgctgagatttaaccgaatcaat
gatggagaagcagacattatgattaattttggccgatgggaacatggtgatggctatcca
tttgatggcaaagatggtctcctggctcatgcatttgcaccagggccaggaattggagga
gactcccattttgatgatgatgaactgtggactcttggagagggacaagtcgttagagtc
aagtatggaaatgcagacgctgaatactgcaaatttcccttctggttcaatggcaaggaa
tacaacagctgcacagatgcaggacgtagtgatggattcctctggtgttccacaaccaaa
gactttgatacagatggcaaatatggcttttgtccccacgagtcactttttacaatgggt
ggcaatggtgaggggcagccatgcaaatttccctttaaatttcaaggccagtcctatgac
cagtgcacaactgaaggcaggacagatggataccgatggtgtggaaccactgaagactat
gacagagataagaaatatggattctgtccagagactgccatgtcaacagttggtggaaac
tcagagggagccccttgtgtattccctttcatcttccttgggaataaatatgagtcctgt
acgagcgcaggtcgcaatgatggcaagctgtggtgcgcttctaccagtagctatgatgat
gaccgcaagtggggcttttgtccagatcaaggatacagtctcttcttagttgctgctcat
gaatttggccatgccatggggttagagcactcagaggatccaggagctctgatggccccc
atctacacctacaccaagaactttcgactttctcaggatgacattaaagggatacaggag
ctatatgaagtgtcgactgatgtcgaacctgggccagggccggggtctggcccacgtcca
acccttggacctgtcactccagagctctgcaagcatgacattgtatttgatggagttgca
caaattagaggagaaacatttttcttcaaagatagattcatgtggaggactgtatacccc
cgaggaaaccccacaggtcctcttcttgtttctacattctggcctgatctgccagagaaa
atcgatgctgtctatgaggcccctcaggatgagaaggctgtattttttttcaggaaacga
gtactgggttattcagccagtaacttggatnagggatatccaaagaaactcaccaacctg
ggactaacccccggatgtgcaacgtttgatgcagctttcaactggggaagaaaccaagag
caatacatttttgctggagacagatactggaagtaa
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