Strigops habroptila (Kakapo): 115619668
Help
Entry
115619668 CDS
T08851
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab00280
Valine, leucine and isoleucine degradation
shab00650
Butanoate metabolism
shab00900
Terpenoid backbone biosynthesis
shab01100
Metabolic pathways
shab03320
PPAR signaling pathway
Module
shab_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115619668 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115619668 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115619668 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115619668 (HMGCS1)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
115619668 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Cullin
Motif
Other DBs
NCBI-GeneID:
115619668
NCBI-ProteinID:
XP_030368188
LinkDB
All DBs
Position
Z:86247957..86263976
Genome browser
AA seq
539 aa
AA seq
DB search
MRGRRQPAMGFRTVSTTMPGSLPVNVEYRWPKDVGIVALEIYFPSQYVDQTELEKYDGVD
AGKYTIGLGQSRMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKS
VKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVY
ATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQ
CYLSALDRCYTVYRNKIQAQWQKEGIDRHFTLNDFGFMIFHSPYCKLVQKSVARLLLNDF
LSDQNPETADGVFSGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNG
NMYTPSVYGCLASLLAQYSPEQLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDKIT
ASLSDLKTRLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVEDLFEGTWYLVRVDEKH
RRTYARRPLMGDGPLEAGVEVVHPGIVHEHIPSPAKKVPRIPATTESEGVTVAISNGEH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggcgccggcagccggcgatgggattccgcacagtatctaccacaatgcctggg
tctcttccagtgaacgttgaataccgttggcccaaagatgtgggaattgttgcactggag
atatatttcccctctcagtacgttgaccagacagagcttgagaagtacgatggtgtggat
gctgggaagtacaccattgggctaggccagtcaagaatggggttctgctctgaccgggag
gatatcaattctctctgcctgactgtggttcagaagctgatggagaggaacagcctttcc
tatgattgtatcgggagactggaggttggaacggagacaataattgataaatcaaaatct
gtaaagactgttctgatgcagctcttcgaagaatctggtaatacagatgtagaaggcatt
gacaccaccaatgcgtgctatggaggcaccgctgctctttttaatgccattaactggatc
gagtccagttcttgggatggacgctacgcacttgttgttgctggagacatagctgtgtat
gccactggaaatgccaggccaacaggtggagctggtgctgttgctatgctggttggtcca
aatgctccattgatttttgagagagggttgcgtggaacccacatgcagcatgcgtatgac
ttctataagccagatatggtctctgaatatcctgtagttgatggcaaactctctatacag
tgctacctcagtgcattagatcgctgctatactgtttatcgcaacaaaatccaggcccag
tggcaaaaagaggggatagacagacatttcaccttgaatgactttggattcatgatcttt
cattctccctactgtaaactggtgcagaaatctgtggctagactcttgctgaatgacttt
ctcagtgaccagaacccggaaacggcagatggtgttttcagtggtctggaggctttcagg
gatgtaaaacttgaagatacatattttgacagagatgtggaaaaagctttcatgaaagcc
agtgcagagctcttcaatcagaaaaccaaagcttcgttacttgtgtccaatcagaatgga
aatatgtacaccccttcagtctatggttgccttgcctctcttttagcccagtactcccca
gagcagctcgcgggacagagaatcagtgtgttctcgtatggctctggttttgctgctaca
ctgtattccatcagagttacgcaggatgccactcctggttctgcactcgacaaaataact
gccagtctgtctgatctcaaaacaagacttgactcaagaaaatgcattgcaccggatgtc
tttgctgaaaatatgaagattagacaggaaactcatcatttggccaactatattccgcag
tgctcagtagaagatctcttcgagggaacttggtaccttgtgcgtgtggatgaaaagcac
aggagaacatacgcgcggcgcccgctcatgggtgatggaccgctggaggcaggcgttgaa
gttgtccacccaggcattgttcatgagcacatcccaagccctgctaagaaagtgccaaga
atccctgcaacaacagaatctgaaggcgttactgttgccatttccaatggggagcattaa
DBGET
integrated database retrieval system
