Sediminicurvatus halobius: LMH63_14405
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Entry
LMH63_14405 CDS
T09389
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMH63_14405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_14405 (nth)
Enzymes [BR:
shai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMH63_14405 (nth)
DNA repair and recombination proteins [BR:
shai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMH63_14405 (nth)
Prokaryotic type
LMH63_14405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
DUF6127
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
UEX77129
LinkDB
All DBs
Position
3070831..3071475
Genome browser
AA seq
214 aa
AA seq
DB search
MNREKRAEIFRRLRDANPAPTTELTYSTPFELLVAVMLSAQATDRSVNAATARLFPVANT
PEAILALGEEGVKQHIRTIGLYNSKAKNLIATCRQLVEQHGGEVPRTRQALEALPGVGRK
TANVILNTAFGEPTLAVDTHIFRVANRTGLAPGRNVREVEDRLLRHVPREFLKDAHHWLI
LHGRYVCTARKPRCGACVIFDLCEFREKDKYAEA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgagaagcgcgccgagatcttccgccgcctccgcgacgccaatccggcgccc
accaccgagctcacctacagcacaccgttcgagctgctggtggcggtcatgctctcggcc
caggccaccgaccgcagcgtcaacgcggcgaccgcgcgcctgttcccggtggcgaacacc
cccgaggcgatcctcgccctgggcgaggaaggcgtgaagcagcacatccggaccatcggg
ctctacaacagcaaggcgaaaaacctcatcgccacctgccggcagctcgtcgagcagcat
ggcggcgaggtcccgcgtacgcgccaggcgctggaggcgctgcccggcgtcggccgcaag
accgccaacgtcatcctcaacaccgcgttcggggagccgaccctggccgtggacacgcac
atcttccgcgtcgccaaccgcaccggtctcgccccggggcgcaacgtgcgcgaggtggag
gaccggctgctgcggcacgtgccgcgggagttcctgaaggacgcccatcactggctgatc
ctgcacgggcgctacgtctgcaccgcccgcaagccccggtgcggcgcctgcgtgatattc
gacctctgcgagttccgggaaaaggacaagtacgcggaggcctga
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