Sphingomonas hankookensis: PPZ50_05595
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Entry
PPZ50_05595 CDS
T08811
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shan
Sphingomonas hankookensis
Pathway
shan01501
beta-Lactam resistance
shan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPZ50_05595
01503 Cationic antimicrobial peptide (CAMP) resistance
PPZ50_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shan03036
]
PPZ50_05595
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shan02000
]
PPZ50_05595
01504 Antimicrobial resistance genes [BR:
shan01504
]
PPZ50_05595
Chromosome and associated proteins [BR:
shan03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PPZ50_05595
Transporters [BR:
shan02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PPZ50_05595
Antimicrobial resistance genes [BR:
shan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PPZ50_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
WCP73017
LinkDB
All DBs
Position
1160057..1161265
Genome browser
AA seq
402 aa
AA seq
DB search
MIRSASPRVRPFLLLPVLIALSACGGGEEKATKNGRGNQGPAQVGFVVVQPTSVAQTADL
AARVVAFQQSEVRPQVAGLIRKRYFTEGALVRAGQTLYQIDPRLYRAQANEAVANLNSAR
ANAEATRVRAERYRPLAEIEAVSRQDYTDAAAQARQAAAAVEQSRAQLETARVNLSFTNV
PAPITGRIGRSYFTEGALVTTNQADPLAVIQRLDPIFVDIQQSAADLLALRRELASGGVV
PASAAVRLKLEDGSDFGQTGTVQFAEVMVNAQTGTVTLRARFPNPQGILLPGMFVRAQFA
QAIDQRAILVPQQAVKRDPKGQATVFVVGPNDTAVQKTVQADRTQGEFWVVTGGLNPGDK
VITQGTANLRPNAKVRPVPANTPQRVQPKPQGDKAATSQKAG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgatccgcgtcgccgcgcgtccgcccgttcctgttgctgcccgtcctgatcgcg
ctgtctgcctgcggcggtggagaggaaaaggcgacgaagaacggccgcggcaaccaggga
ccggcacaggtcggcttcgtcgtggtgcaacccaccagcgtcgcccagaccgccgatctc
gccgcgcgggtcgtcgcgttccagcagtcggaggtccgtccgcaggtcgccgggctgatc
cgcaaacgctatttcaccgaaggcgcgttggtccgtgccggacagacgctctaccagatc
gatccgcgcctctatcgtgcgcaggccaatgaagcggtcgccaacctcaacagcgcccgc
gccaatgccgaggcgacccgcgtccgcgccgaacgctaccgcccgctggcggagatcgag
gcggtcagccgccaggactataccgacgccgccgcgcaggcgcgtcaggccgccgccgcc
gtcgaacagagccgggcgcagttggagacggcgcgcgtgaacctgtccttcaccaacgtc
cccgcaccgatcaccggacggatcgggcgcagctatttcaccgaaggcgcgctggtcacc
accaaccaggccgatccgctggcggtgatccagcggctcgacccgatcttcgtcgatatc
cagcaatctgccgccgacctccttgcgctgcgtcgcgagctggccagcggcggggtggtc
ccggcatcggccgctgtccgcctgaaactggaggacggcagcgacttcggccagaccggc
acggtccagttcgccgaggtgatggtcaatgcccagaccggcacggtgacgctgcgcgcc
cgcttccccaatccccagggcatcttgctgcccggcatgttcgtccgcgcgcaattcgcg
caagcgatcgaccagcgcgcgatcctcgtgccccaacaggcggtgaagcgcgatcccaag
gggcaggcgaccgtcttcgtcgtcggcccgaacgataccgccgtgcaaaagacggtgcag
gccgaccgcacccagggcgaattctgggtcgtgaccggtggcctcaaccccggcgacaag
gtgattacgcaggggaccgcgaacctgcgccctaacgcgaaggtccggccggtcccggcc
aataccccgcaacgcgttcaacccaagccgcagggcgacaaggctgccacgtcacagaag
gcgggataa
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