Sphingomonas hankookensis: PPZ50_05600
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Entry
PPZ50_05600 CDS
T08811
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shan
Sphingomonas hankookensis
Pathway
shan01501
beta-Lactam resistance
shan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPZ50_05600
01503 Cationic antimicrobial peptide (CAMP) resistance
PPZ50_05600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shan02000
]
PPZ50_05600
01504 Antimicrobial resistance genes [BR:
shan01504
]
PPZ50_05600
Transporters [BR:
shan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PPZ50_05600
Antimicrobial resistance genes [BR:
shan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PPZ50_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF520
Motif
Other DBs
NCBI-ProteinID:
WCP73018
LinkDB
All DBs
Position
1161269..1164460
Genome browser
AA seq
1063 aa
AA seq
DB search
MSRIFIDRPIFAWVIAIIVMLGGLGAILSLPIAQYPDVAPPQVNIRATYPGANAETIQNS
VTQIIEQQLTGIDGLLYFSSQSSSRGQVTISATFDKGVDPDIAQVQVQNQVQQALSRLPQ
QVQQQGIRVTKSNPDFLMIVGIFDETDQRTNGDVSDYMEANLVEPLARINGVGETNVFGS
QYAMRIWLDPAKLASFSLMPGDVITAIQNQNTEVAAGELGGQPSGPEQQLNATVTAQSRL
QTPAQFQAIILKTLPDGSTVRLADVARIELGQENYAALSRVNAHPGAGLAISLAPGADAL
ETAELVKAEVERQSAKFPAGLTFAYANDTTAFIKLSIEEVVKTLVEAVILVVIVMFVFLQ
SWRATLIPTIAVPVVLLGTFGIFYLFGFSINTLTLFGLVLAIGLLVDDAIVVVENVERLL
EENPDMSPRDATIQSMEEIQVALVAIGIVLSAVFLPMAFFGGSTGVIYRQFSVTIVAAMV
LSVLVALILSPALTATLLKQKKRGEDGSLEGGWLERKFPRVAHFGERLRVGFNTRFDRGV
AKYERGVVHVIDRKWLYLLLYAAVLAILALLFFRLPTSFLPTEDQGAATVRFQLPAGSTR
SRTEEVQRAVEKYLLTYEKDNIRTILTVAGGGGGSSGQNTGQGFINFTDWAERKGKENSA
DAIVARASAAFGGLRDAQVFALLPPAVRGLGQANGFTMELQNASGMTTAEFAEARDKLLA
AANADPMLTGVRLSELPDIATLNVDIDQQRLSTLGLTQGDVNNTLSTAWGGRYVNDFIDR
GRVKRVFVQGDAPYRSEPTDLSQWFVRGSNGQMVPFSSFSRTGWTVAPTTLSRFQGLPSF
EFQGQAAPGVSSGEAMERIAELAGQIPGTSVAWAGLSFQERLSSGQAPILYGLSILVVFL
CLAALYESWSIPIAVLLVIPLGLIGAIAFVTLRGLENDVYLQIGLLTTMGLAAKNAILMI
EFAEQAEKKGARVIDAALEAARIRLRPILMTSLAFIFGVLPLAISTGAGANSRIAIGTAV
IGGMFTATVLAIFYIPLFFVMVRRGVRDGLARLRHKPQKEAEA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtatcttcatcgaccgcccgatcttcgcatgggtgatcgcgatcatcgtgatg
ctgggcgggctgggcgcgatcctgtcgctgccgatcgcccaatatcctgacgtcgccccg
ccacaggtcaatatccgcgcgacctatcccggtgcgaatgcggaaacgatccagaactcg
gtcacccagatcatcgaacagcagctgaccggcatcgatggcctgctctatttcagctcg
caaagcagctcgcgcgggcaggtgacgatcagcgcgaccttcgacaagggcgtcgatccc
gatatcgcgcaggtgcaggtgcagaaccaggtgcagcaggccctgtcgcgcctgccgcaa
caggtccagcagcagggtatccgcgtcaccaagtcgaaccccgacttcctgatgatcgtc
ggcattttcgacgaaaccgaccagcgcaccaatggcgacgtgtcggactatatggaggcg
aacctcgtcgagccgctggcgcggatcaacggcgtcggcgaaaccaacgtgttcggatcg
caatatgcgatgcgcatctggctcgacccggcgaagctcgcctccttctcgctgatgccc
ggcgatgtcatcaccgcgatccagaaccagaataccgaagtcgccgcgggcgaactgggc
ggccagccgtccggccccgaacagcagttgaacgccaccgtcaccgcccagtcgcggctc
cagaccccggcgcagtttcaggcgatcatcctgaagacgttgcccgacggctcgaccgtg
cggctcgccgatgtcgcgcgcatcgaactgggccaggaaaactacgcggcgttgagccgg
gtcaacgcccatcccggcgccggcctcgccatcagcctcgcgcccggcgccgacgcgctg
gagaccgccgagctggtcaaggcggaggtcgaacgccaatcggccaaatttcccgccggg
ctgaccttcgcctatgccaacgacaccaccgccttcatcaagctgtcgatcgaggaagtg
gtcaagacgctggtcgaggcggtcatcctcgtcgtcatcgtcatgttcgtgttcctgcag
agctggcgcgcgacgctgattccgacgatcgcggtgcccgtcgtgctgctcggcaccttc
ggcatcttctatctcttcggcttttcgatcaacacgctgacgctgttcggactggtgctc
gccatcggcctgctggtcgacgacgcgatcgtcgtggtcgagaatgtcgagcgcctgctc
gaagaaaatcccgacatgtcgccgcgcgatgcgacgattcagtcgatggaggaaatccag
gtcgcactggtcgcgatcggcatcgtgctgtcggcggtgttcctgccgatggcgttcttc
ggcgggtcgaccggggtcatctatcgccagttttcggtgacgatcgtcgccgcgatggta
ctgtcggtgctggtcgcgctgatcctgtcgccggcgctgaccgcgaccctgctcaagcag
aagaagcgcggcgaggacggcagcctcgagggcggctggctggaacgcaaattcccgcgc
gtcgcacatttcggcgaacggctccgcgtcggcttcaacacccggttcgaccggggcgtg
gcgaagtatgaacgcggcgtcgtccatgtcatcgaccgcaaatggctctatctgctactc
tatgcggcggtgctcgccatcctcgcgctcctcttcttccgcctgccgaccagcttcctg
ccgaccgaggatcagggggcggcgaccgtccggttccagctgcccgccgggtcgacgcgc
agccggaccgaagaggtgcagcgcgcggtcgagaaatatctgctgacctatgagaaggac
aatatccgcaccatcctgaccgtcgccggcggcggcggcggcagttcggggcagaatacc
gggcaggggttcatcaacttcaccgactgggcggaacgcaagggcaaggaaaacagcgcc
gacgcgatcgtcgcgcgcgcctccgccgcgttcggcggcttgcgcgatgcgcaggtcttc
gcgctgctgcctcccgcggtgcgcggcctgggacaggcgaacggcttcaccatggagctg
cagaacgccagcggcatgaccaccgccgaatttgccgaagcgcgcgacaagctgctggcc
gccgccaatgccgatccgatgctgaccggggtgcgcctgtccgaactgcccgacatcgcg
acgctgaacgtcgatatcgaccagcagcggctctccacgctcggcctgacgcagggcgat
gtgaacaacacgttgtcgaccgcctggggcggccgctacgtcaacgacttcatcgatcgc
ggccgggtgaagcgcgtgttcgttcagggcgacgcgccctatcgcagcgaaccgaccgac
ctcagccaatggttcgtgcgcggatcgaacgggcagatggtgcccttctcctccttctcg
cgcaccggctggaccgtcgccccgaccaccctgtcgcgctttcagggcctgccctcgttc
gaatttcaggggcaggcggcacccggcgtcagctcgggcgaggcgatggagcgcatcgcc
gaactcgctggccagattccgggcaccagcgtcgcctgggccgggctgtcgtttcaggag
cggctgtcgtcggggcaggcgccgatcctctacggcctgtcgatcctcgtcgtgttcctc
tgcctcgccgcactgtatgaaagctggtcgatcccgatcgcggtgctgctggtcatcccg
ctcgggctgatcggggcgatcgccttcgtcacgctgcgtgggctggagaacgacgtctat
ctccagatcgggttgctgacgacgatgggcctcgccgccaagaacgcgatcctgatgatc
gaattcgccgaacaggcggaaaagaagggcgcgcgcgtcatcgatgccgcgctggaggca
gcgcgcatccgcctgcgcccgatcctgatgacgtcgctcgccttcatcttcggcgtgctg
ccgctcgccatctcgaccggggcgggggccaacagccgcatcgccatcggcacggcggtg
atcggcggcatgttcaccgcgacggtgctggcgatcttctacatcccgctgttcttcgtg
atggtccggcgcggggtgcgcgacggtctcgccaggctgcgtcacaagccacaaaaggag
gccgaggcatga
DBGET
integrated database retrieval system
