Sphingomonas hankookensis: PPZ50_06935
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Entry
PPZ50_06935 CDS
T08811
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shan
Sphingomonas hankookensis
Pathway
shan01501
beta-Lactam resistance
shan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPZ50_06935
01503 Cationic antimicrobial peptide (CAMP) resistance
PPZ50_06935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shan02000
]
PPZ50_06935
01504 Antimicrobial resistance genes [BR:
shan01504
]
PPZ50_06935
Transporters [BR:
shan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PPZ50_06935
Antimicrobial resistance genes [BR:
shan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PPZ50_06935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Inhibitor_I42
Motif
Other DBs
NCBI-ProteinID:
WCP73269
LinkDB
All DBs
Position
1494198..1497416
Genome browser
AA seq
1072 aa
AA seq
DB search
MSRYFIDRPIFAWVIAIVMMLAGAIAIRSLPIAQFPEIAPPAVAITATYPGADAETLERT
TTQIIEQQLKGIDNLRYFSSSSSSAGTVTITLTFEQGTDPDIAQVQVQNKLQAATPLLPQ
EVQRQGIQVTKSAASFLLVVGLVSTDGSHSNNDLSDMVVSQFQDPISRVSGVGELQMFGA
QYAMRIWLDPIKLNSYQLTVADVTSAVQSQNAQVSAGQIGAQPAPKEQMLNATVSVQSRL
QTPEQFANIRLKTNADGAVVRLGDVARVELGAENYGFDVQYNGKPASGFGVRLAAGANAL
DTVELVKQRAEEIGRGLPGDVKVIYPYDTTPFVRLSVEQVIHTLIEAVVLVFLVMFLFLQ
NWRATIIPTIAVPVVLLGTFAVMAVAGFTINTLTLFGMVLAIGLLVDDAIVVVENVERLI
QTEGLSPKEAARKSMDEITGALVGIGLVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMVL
SVLVALILTPALCATILKPHDPHKHEQGNGPLARFFRWFNDRFERSQHKYENGVRRTTRS
WKRSMLVYLLIVLGMVFVFTRLPSGFLPDEDQGTVLALVQGPAGATSSRTDKGLTLVRDH
FLKQESGNVAGVFTINGFSFAGQGQNAGLVFVNLKPWEERSGAENKAQAIVGRAMGTFAG
YKDGLIFALVPPAVQELGNATGFDVQLVDTGGIGHERLVQARNMMLGMAAQDPRVAQVRP
LSLEDAPQLKVKIDEDKARALGLDLADVNSTIATAWGGGYINDFIDRGRVKRVYVQADAP
YRLAPEDVGDLYVRNATGQMVPFTAFSTLEWANAPVSLTRYNGQSAMQLQGSPGPGLSTG
AAMEAMEEIHAKLPPGTALEWTGLSFEERLSGGQAPALYGLSLLIVFLCLAALYESWSVP
ISVLLVVPLGILGALLAAWLTGLNNDIYLQVGLITTIGVSAKNAILIVEFAEERMADGLN
AVDAAVEAARLRLRPILMTSLAFVFGVLPLAISTGAGAGGQNAIGRAVVGGMLSATVLAI
FFVPMFFVVVLRLFGHGGKDTPSANRPSANDDVEPDGGNRSSDGGEPAPQGA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctatttcatcgaccggcccatcttcgcatgggtcatcgccatcgtcatgatg
ctggccggcgcgatcgcgatccgcagcctgccgatcgcccagttcccggaaatcgcgccg
cccgccgtcgcgatcaccgccacctatccgggtgcggatgccgagacgctggagcgcacg
acgacccagatcatcgagcagcagctcaagggcatcgataacctgcgctacttctcgtcc
tcgtcctcctcggcggggacggtgacgatcacgctgacgttcgaacagggcaccgatccc
gacattgcgcaggtgcaggtgcagaacaagctgcaggcggcgaccccgctgctgccgcag
gaggtccagcgccaggggattcaggtcaccaagtccgccgccagcttcctgctggtcgtc
ggcctcgtgtcgaccgacgggtcgcacagcaacaacgacctgtccgacatggtcgtgtcg
cagttccaggacccgatcagccgcgtgagcggggtcggcgagttgcagatgttcggcgcg
caatatgcgatgcgcatctggctcgatccgatcaagctcaacagctaccagctgaccgtc
gccgacgtgacgtcggcggtgcagtcgcagaacgcccaggtttcggccggccagatcggc
gcgcagccggcgcccaaggagcagatgctcaacgccacggtcagcgtgcagtcgcggctc
cagacgcccgagcagttcgccaatatccgcctgaagaccaacgccgacggcgcggtcgtc
cggctgggcgatgtcgcgcgggtcgagctgggtgccgagaattacggcttcgacgtgcag
tataacggcaagcccgcctcgggcttcggcgtgcgccttgccgccggtgccaatgcactc
gacacggtcgaactggtcaagcagcgcgccgaggaaatcggtcgcggcctgccgggcgac
gtcaaggtcatctacccgtacgacacgaccccgttcgtccgcctgtcggtcgaacaggtc
atccacacgctgatcgaggcggtggtgctcgtcttcctcgtcatgttcctgttcctgcag
aactggcgggcgacgatcatcccgaccatcgcggtgccggtggtgctgctcggcaccttc
gcggtgatggcggtcgccgggttcacgatcaacacgctgaccctgttcggcatggtgctg
gcgatcggcctgctggtcgacgacgcgatcgtcgtcgtcgaaaacgtcgaacgcctgatc
cagaccgaggggctgtcgccaaaggaagccgcgcgcaagtcgatggacgagatcaccggc
gcgctggtgggtatcggcctcgtcctgtcggcggtgttcctgccgatggcgttcttcggc
gggtcgaccggcgtgatctatcgccagttctcgatcacgatcgtctcggcgatggtgctc
tcggtgctggttgcgctgatcctgacgccggcactctgcgccacgatcctgaaaccgcac
gacccgcacaagcatgagcagggcaacggcccgctcgcgcgcttcttccgctggttcaac
gaccggttcgaacgcagccagcataagtacgagaacggcgtccggcgcaccacgcgcagc
tggaagcggtcgatgctggtctacctgctgatcgtgctgggcatggtgttcgtgttcacg
cgcctgccctcgggcttcctgcccgacgaggatcaggggacggtgctggcgctggtccag
ggtccggccggcgcgacgagcagccgtactgacaaggggctgacgctggtgcgcgaccat
ttcctgaagcaggaaagcggcaatgtcgccggtgtgttcaccatcaacggtttcagcttc
gcggggcaggggcagaatgccggtctggtgttcgtcaacctgaagccatgggaggagcgc
agcggcgccgagaacaaggcgcaggcgatcgtcggccgcgcgatgggcacattcgccggg
tataaggacgggctgatctttgcgctggtcccgcccgcggtgcaggagctgggcaacgcc
accggcttcgacgtgcagctggtcgataccggcggcatcggccatgaacggctggtgcag
gcgcgcaacatgatgctgggcatggcggcgcaggacccgcgcgtggcacaggtccgtccg
ctcagcctggaggatgcgccgcagctcaaggtcaagatcgacgaggacaaggcgcgcgcg
ctcgggctcgacctcgccgacgtcaactcgaccatcgcgaccgcatggggcggcgggtac
atcaacgacttcatcgatcgcggtcgcgtgaagcgcgtctatgtccaggccgatgcgccc
tatcgcctcgcgccggaggatgtcggcgacctgtatgtccgcaacgccaccggacagatg
gtgccgttcaccgccttctcgacgctggaatgggccaatgctccggtgtcgctgacccgc
tataacgggcagtcggcgatgcagctgcagggatcgcccggaccggggctgagcaccggt
gcggcgatggaggcgatggaggaaatccatgccaagctgccgccgggcaccgcgctggaa
tggaccgggctgtcgttcgaggaacggttgtcgggcggccaggcaccggcgctgtacggc
ctgtcgctgctgatcgtgttcctgtgcctggcggcgctgtacgaaagctggtcggtgccg
atctcggtgctgctggtcgtgccgctgggcatcctgggcgcgctgctggcggcgtggctg
acggggctgaacaacgacatctacctccaagtcgggctgatcaccacgatcggcgtgtcg
gcgaagaacgcgatcctgatcgtggaatttgccgaggagcggatggccgacggcctgaat
gcggtcgatgcggcggtcgaggcggcgcggctgcggttgcgcccgatcctgatgacgtcg
ctggcgttcgtcttcggcgtgttgccgctggcgatcagcaccggtgccggtgccggtggc
cagaacgcgatcggccgcgcggtggtcggcggcatgttgtcggcgacggtcctcgcgatc
ttcttcgtaccgatgttcttcgtcgtcgtgctgcgcctgttcgggcacggcggcaaggac
actccgtccgccaaccggccgtccgcgaacgacgacgtcgaacccgatggcggcaaccgg
tcctccgatggcggcgaacccgcgccgcagggggcatga
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