Sphingomonas hankookensis: PPZ50_08750
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Entry
PPZ50_08750 CDS
T08811
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shan
Sphingomonas hankookensis
Pathway
shan00300
Lysine biosynthesis
shan00550
Peptidoglycan biosynthesis
shan01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPZ50_08750
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPZ50_08750
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shan01011
]
PPZ50_08750
Enzymes [BR:
shan01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PPZ50_08750
Peptidoglycan biosynthesis and degradation proteins [BR:
shan01011
]
Precursor biosynthesis
Amino acid ligase
PPZ50_08750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
DUF6668
LpxD
Motif
Other DBs
NCBI-ProteinID:
WCP70486
LinkDB
All DBs
Position
1846409..1847824
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AA seq
471 aa
AA seq
DB search
MKLGTITGGDEPQTVTGFAIDHRKVAPGTIFGAFDGARVNGEDFIPAAIAAGAIAVVARP
EAVVEGAVHIAARDPREAFARAAAQFFAPFPPTCVAVTGTNGKTSTVEMVRQLWRMQGHH
AASIGTLGVTTADERVVTGLTTPDIVTFLSNVAGLAREGVTHVAFEASSHGLSQYRTEGL
PVRAAAFTNLSRDHLDYHGDMASYLTAKLRLFSEVLADDGVAVVWIDDPHADRVMDLARV
RGNRLITVGEHGETLRLVGREPSLLGQALTIEAEGATHKVQLPLIGAYQAANALTAAGLV
LATGGTLAATLAGLARLQPVRGRLERAVILPNGAPVYVDYAHTPDALEAAIAALRPHAEG
RLIVVFGAGGDRDNGKRAPMGEVVAAQADVAIVTDDNPRTEDAAQIRAQVLAGAPSATEI
GDRRAAIRAACDMAQPGDIVLIAGKGHEQGQIVGDMILPFDDVQVARDCAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaggaaccatcacgggcggcgatgaaccgcagacggtgaccggcttcgcgatc
gatcatcgcaaggtcgcaccgggcacgatcttcggcgcgttcgacggggcgcgggtcaat
ggcgaggacttcatccccgccgccatcgccgctggcgcgatcgctgtcgtcgcccggcca
gaagcggtggtcgagggcgcggtccacatcgcggcacgcgacccgcgcgaggcgtttgcc
cgcgccgccgcgcagttcttcgcgccgttcccgccgacctgcgtcgcggtgaccggcacc
aacggcaagaccagcaccgtcgaaatggtgcgccagctgtggcggatgcaggggcaccac
gccgcgtcgatcgggacgctgggggtgaccaccgccgacgaacgcgtcgtcaccggcctg
accacccccgacatcgtcaccttcctgtcgaacgtcgcagggctggcgcgcgaaggcgtg
acccatgtcgcgttcgaggcgtcgagccacggcctgtcgcaataccgcaccgaagggctg
ccggtccgtgcggcggcgttcaccaatctcagccgcgatcacctcgactatcatggcgac
atggcgagctatctgaccgccaagctgcgtttgttttccgaagtgctggccgatgacggc
gtagcggtcgtgtggatcgacgatccccatgccgaccgcgtgatggaccttgcccgcgtc
cgcggcaaccgcctgatcaccgtcggcgaacatggcgagacgctgcggctggtcggccgc
gaaccgagcctgctcggacaagcgctgacgatcgaggcggagggcgcgacccacaaggtg
cagttgccgctgatcggcgcctatcaggcggcaaacgcgctgaccgccgccggcctcgta
ctggcgaccggcggcacgctggcggcgacgctggcgggcctcgcccggttgcagccggtg
cgcgggcggctggagcgtgcggtgatcctgcccaatggcgcgccggtctatgtcgattac
gcacatacccccgacgcgctcgaagcggccatcgccgcgttgcgtccccatgccgagggg
cggctgatcgtcgtgttcggcgcgggcggcgaccgcgacaacggcaagcgggcgccgatg
ggcgaggtcgtggcggcgcaggccgacgtcgcgatcgtcaccgacgacaatccccggacc
gaggatgcggcgcagattcgtgcgcaggtgctggcaggcgctcccagcgcgaccgagatc
ggcgaccgtcgtgccgccattcgtgcggcatgcgacatggcgcagccgggtgatatcgtg
ctgatcgcgggcaagggccatgaacagggccagatcgtcggcgacatgatcctgccgttc
gacgacgtacaggtggcgcgtgactgtgcgggctga
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