Shewanella halotolerans: K0H81_09305
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Entry
K0H81_09305 CDS
T09172
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shao
Shewanella halotolerans
Pathway
shao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H81_09305 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_09305 (nth)
Enzymes [BR:
shao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0H81_09305 (nth)
DNA repair and recombination proteins [BR:
shao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0H81_09305 (nth)
Prokaryotic type
K0H81_09305 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
ORC6_2nd
HHH_8
HHH_5
EPSP_synthase
Motif
Other DBs
NCBI-ProteinID:
QYJ91742
LinkDB
All DBs
Position
complement(2195180..2195821)
Genome browser
AA seq
213 aa
AA seq
DB search
MNTEKRRKILEIFRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
AQAIYDLGVEGLKEYIKTIGLYNNKAINVIKACEILLKKHGGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVANRTKFAMGKNVDQVEQKMLKVVPAEFKVDVHHWFI
LHGRYTCVARKPRCGSCLIEEHCEFKEKVYPDE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgagaaacgtcgtaagatcctggagatctttcgcgataacaatcctaagcca
gaaaccgagcttaacttctcctctcccttcgagctgctggttgccgtcaccctgtcggcc
caggccacggacgtaagcgtcaacaaggccaccgacaagctatttcccgtggcaaatacc
gcccaagccatctatgacctaggcgtcgaggggctcaaggaatatatcaaaaccataggc
ctgtataacaacaaggcaatcaacgtcatcaaggcctgtgagatcttgctgaagaagcat
ggcggcgaggtgcccgaagacagagaggcactcgaagccctgcctggcgtgggccgtaag
acggccaacgtagtgttaaacaccgccttcggctggccgaccattgccgtcgatacccat
atcttccgcgtcgccaaccgcaccaagtttgccatgggcaagaacgtggatcaggtcgag
cagaagatgttaaaggtagtaccggccgaatttaaggtagatgtgcaccactggtttatt
cttcacggtcgctatacctgtgtcgcccgtaagccaagatgcggcagttgtttgattgaa
gagcactgtgagtttaaagagaaggtctacccggacgaatag
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