KEGG   Streptomyces hawaiiensis: CEB94_28705
Entry
CEB94_28705       CDS       T06917                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
shaw  Streptomyces hawaiiensis
Pathway
shaw03030  DNA replication
shaw03410  Base excision repair
shaw03420  Nucleotide excision repair
shaw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shaw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CEB94_28705
   03410 Base excision repair
    CEB94_28705
   03420 Nucleotide excision repair
    CEB94_28705
   03430 Mismatch repair
    CEB94_28705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shaw03032]
    CEB94_28705
   03400 DNA repair and recombination proteins [BR:shaw03400]
    CEB94_28705
Enzymes [BR:shaw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CEB94_28705
DNA replication proteins [BR:shaw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CEB94_28705
DNA repair and recombination proteins [BR:shaw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CEB94_28705
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CEB94_28705
   MMR (mismatch excision repair)
    DNA ligase
     CEB94_28705
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CEB94_28705
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH_5 HMBD Zn_ribbon_TFIIB
Other DBs
NCBI-ProteinID: QCD58385
UniProt: A0A6G5RJS5
LinkDB
Position
6098995..6101190
AA seq 731 aa
MAGDKQAETTTVPAEAREKHARLAEQIEEHRFRYYVKDAPVVSDAEFDQLLRSLEALEEE
HPELRTPDSPTQKVSGSYETEFTAVEHRQRMLSLDNTFNDEEMAAWTERIARELGEQKYH
FLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLKGDDVPDLVE
IRGEVYFPMEKFQELNARLVEAGDKPFANPRNAAAGSLRQKDPRVTATRPLHMVVHGIGA
LEGFTGLTRLSQAYDLLKTWGLPTSRHNKVVDGLEGVREFIAYFGENRHSVEHEIDGVVV
KLDQIPLQGRLGSTSRAPRWAIAYKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVTVA
GSEVEFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVADLRDGTEREFVMPGECP
ECGTALRPMKEGDVDLRCPNARTCPAQLRERLFYLAGRKALDIEHFGYVAAAALTAPLEP
KTPPLADEGDLFDLTIEQLLPIKAYVLDPDSGLPKRDPKTGEEKVATIFANQQGEPRKNA
VAMLENIAAAKERPLARLLTSLSIRHVGPVAAEALAREFRSIERIDQATEEELKNTDGVG
QIVATAVKEWFAEDWHREIIRKWKAAGVRLEEESTGEDEGPRPLEGLTVVVTGTLEHFTR
DGAKEALQSRGAKVTGSVSKKTSFVVVGDSPGTKYDKAMQLKVPVLNEEGFGVLLEQGPD
AAAEVALSAEE
NT seq 2196 nt   +upstreamnt  +downstreamnt
gtggccggcgacaagcaagcggagacgacgacggtgcccgccgaggcacgggagaagcac
gcgcgcctcgcggagcagatcgaggagcaccgcttccgctactacgtgaaggacgctccc
gtcgtcagcgacgcggagttcgaccagctgctgcgttccctggaggcgctggaggaggag
cacccggagctgcgcaccccggactcaccgacccagaaggtctccgggtcctacgagacg
gagttcacggcggtcgagcaccgccagcgcatgctctccctcgacaacacgttcaacgac
gaggagatggccgcctggacggagcgcatcgccagggaactgggcgagcagaagtaccac
ttcctgtgcgagctgaaggtcgacggcctcgccgtgaacctcacctacgagcacggccgc
ctcacccgcgcggccacccgcggcgacggccgcaccggcgaggacatcacaccgaacgtg
cggacgatcgcggagatccccgaccgcctcaagggcgacgacgtccccgacctcgtggag
atccgcggcgaggtctacttcccgatggagaagttccaggagctcaacgcccgcctcgtc
gaggccggtgacaagcccttcgccaacccgcgcaacgcggcggccggttcactgcgccag
aaggacccgcgcgtcacggccacccgccccctgcacatggtggtccacggcatcggcgcc
ctggagggcttcaccggcctgacccggctctcccaggcctacgacctcctcaagacctgg
ggcctgcccacctcccggcacaacaaggtggtcgacggcctggaaggcgtacgggagttc
atcgcctacttcggcgagaaccgccactccgtggagcacgagatcgacggcgtggtcgtc
aagctcgaccagatccccctccagggccgcctcggctccacctcgcgcgccccgcgctgg
gcgatcgcgtacaagtacgcgccggaggaggtcaacaccaagctcgtcaacatccgcgtg
ggcgtgggccgcacgggtcgcgtcactccctacgcccaggtcgagccggtcacggtcgcg
ggctccgaggtcgagttcgccacgctgcacaaccaggacgtggtcaaggccaagggcgtc
ctcatcggggacacggtcgtgctgcgcaaggccggtgacgtcatcccggagatcctcggc
cccgtcgccgacctgcgcgacggcaccgagcgcgagttcgtcatgccgggcgagtgcccc
gagtgcggtacggcgctgcggccgatgaaggagggcgacgtcgacctgcgctgccccaac
gcccgtacttgcccggcccagttgcgcgagcgcctgttctacctcgcgggccgcaaggcc
ctggacatcgagcacttcggctacgtcgccgccgccgccctcaccgccccgctggagccg
aagaccccgccgctggccgacgagggcgacctgttcgacctcaccatcgagcagctgctg
cccatcaaggcgtacgtcctcgacccggacagcgggctgcccaagcgcgacccgaagacc
ggcgaggagaaggtcgccacgatcttcgccaaccagcagggcgagccccgcaagaacgcg
gtcgccatgctggagaacatcgccgcggccaaggagcgccccctcgcccgcctcctcacc
agcctgtcgatccgtcacgtcggccccgtcgccgccgaggcgctggcccgcgagttccgc
tcgatcgagcggatcgaccaggccacggaggaggaactgaagaacaccgacggcgtcggc
cagatcgtggccaccgccgtcaaggagtggttcgccgaggactggcaccgcgagatcatc
cgcaagtggaaggccgccggcgtccgcctggaggaggagagcaccggcgaggacgaaggg
ccgcgccccctcgaaggcctcaccgtcgtcgtcacgggcaccctcgaacacttcacgcgg
gacggtgccaaggaggcgctgcagagccgcggagcgaaggtgaccggctcggtttcgaag
aagacctcgttcgtcgtggtgggggacagccccgggacgaagtacgacaaggcgatgcag
ctgaaggttccggttctgaacgaggagggtttcggggtcctgctggagcagggaccggac
gcggcggccgaagtcgccctttcggccgaggagtag

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