Sulfuritalea hydrogenivorans: SUTH_01034
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Entry
SUTH_01034 CDS
T03591
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shd
Sulfuritalea hydrogenivorans
Pathway
shd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SUTH_01034 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shd03400
]
SUTH_01034 (nth)
Enzymes [BR:
shd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SUTH_01034 (nth)
DNA repair and recombination proteins [BR:
shd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SUTH_01034 (nth)
Prokaryotic type
SUTH_01034 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BAO28840
UniProt:
W0SDJ9
LinkDB
All DBs
Position
complement(1059863..1060495)
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AA seq
210 aa
AA seq
DB search
MSPKKVREFFSRLAAANPEPKSELEYATPFQLLVAVVLSAQATDKGVNRATRALFRDHPT
PQAIAALGVEGLAEYINTIGLYPTKAKNVVALSRLLLERHGGDVPHDRAALEALPGVGRK
TANVVLNIAFHEPTIAVDTHIFRVGNRTGLAPGSTVEAVEQKLLKVVPAEFRLHAHHWLI
LLGRYTCKARSPDCVHCPVFDLCACKEKNV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaagaaggttcgcgagttcttttcccgcctcgcggcggcgaaccccgagccg
aaatccgaactcgaatacgcgacaccctttcagttgctggtggccgtggtgctttccgcc
caggccaccgacaagggcgtgaatcgcgccacgcgcgcgctgttccgcgaccacccgaca
ccgcaggcgatcgccgcgctgggcgtggaaggtcttgccgaatacatcaataccatcggc
ctctatccgaccaaggccaagaacgtcgtggccctctcgcgcctgctgctggaacgccac
ggcggcgacgtgccgcatgaccgcgccgctctcgaagccctgcccggcgtcggccgcaag
accgccaacgtggtgctcaacatcgccttccacgaacccaccatcgcggtcgacacccac
atcttccgcgtcggcaaccgcaccggactggcgccgggcagcacggtcgaagcggtcgaa
cagaagctgctcaaggtggtgcccgccgaattccgcctgcacgcccaccactggctgatc
ctgctcggccgctacacctgcaaggcgcgcagccctgattgcgtgcattgcccggtcttc
gacctctgcgcctgcaaggagaaaaatgtttaa
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