KEGG   Sulfuritalea hydrogenivorans: SUTH_01741
Entry
SUTH_01741        CDS       T03591                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
shd  Sulfuritalea hydrogenivorans
Pathway
shd03030  DNA replication
shd03410  Base excision repair
shd03420  Nucleotide excision repair
shd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SUTH_01741
   03410 Base excision repair
    SUTH_01741
   03420 Nucleotide excision repair
    SUTH_01741
   03430 Mismatch repair
    SUTH_01741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shd03032]
    SUTH_01741
   03400 DNA repair and recombination proteins [BR:shd03400]
    SUTH_01741
Enzymes [BR:shd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SUTH_01741
DNA replication proteins [BR:shd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SUTH_01741
DNA repair and recombination proteins [BR:shd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SUTH_01741
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SUTH_01741
   MMR (mismatch excision repair)
    DNA ligase
     SUTH_01741
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SUTH_01741
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH BRCT_2 5_3_exonuc
Other DBs
NCBI-ProteinID: BAO29533
UniProt: W0SHX0
LinkDB
Position
1762014..1764068
AA seq 684 aa
MLLQEAAARTESLRREIERHNHAYYVLDAPTIPDAEYDKLFRELQALEAAHPQLASADSP
TRRVGGKPLPEFAPVRHAVPMLSIRTETDTEPTGARAFDARVRRELGLNDADAAVEYAAE
LKFDGLAISLRYENGVLVQAATRGDGETGEDVTQNIRTVRRIPLRLEGEGPPALEVRGEV
FMSRPDFERYNEKQRALGRATLVNPRNGAAGSIRQLDPAMTAERPLSFYAYGLGESRGWA
LPATHGGVLDALAAFGLPVCEHRAVVRGADGLIAFHARIREARDALPFDIDGVVYKVNSL
ALQQQLGFVTREPRWAVAHKYPAEEALTTVEAIEVQVGRTGAITPVARLAPVFVGGVTVT
NATLHNEGEARRKDVRIGDTVVVRRAGDVIPEVVSVVLERRPMKDLVEALHGPWELLKEY
PTCPVCHSTIEKPEDEAIARCTGGLFCPAQRKQALLHFASRRAMDIEGLGDKLVEQLVDN
AIVKTPADLYKLGLLAMVNLERMAEKSATNILAAIEKSKTTTLARFIFALGIRNVGEATA
KDLARHFGNLDALMAADIDRLQQVPDVGPVVAASIARFFAEPHNVEVIEQLRAAGVNWPE
GEPSAVANSPIAGKTFVLTGTLPTLTRDEAKDMIEALGGKVAGSVSKKTDYVVAGAEAGS
KLDKAQALGVSILDERQFRELVKT
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgcttctgcaagaagcagcggcgcggaccgaaagcctgcgtcgcgaaattgaacggcac
aaccatgcctattacgtgctcgatgcgccgaccattccggatgccgagtacgacaagctg
ttccgcgagttgcaggcgctggaggcggcgcatccccagctggccagcgccgattcgccg
acccggcgggtcggtggcaagccgctgcccgaattcgccccggtgcgccatgccgtgccg
atgttgtcgatccgcaccgaaaccgacaccgagccgacgggcgcgcgcgctttcgatgcc
cgcgtgcgccgcgagttgggcctgaatgatgccgatgctgccgtcgagtacgccgccgaa
ctgaagttcgacggcctcgccatcagcctgcgctatgaaaacggcgtgctggtgcaggcc
gcgacccgcggcgacggcgagaccggtgaggacgtcacgcagaacatccgcaccgtgcgc
cgcatcccattgcgccttgaaggcgaagggccgccggcgctggaggtgcgcggcgaggtg
ttcatgagtcgtcccgatttcgagcgctacaacgagaagcagcgggcgctgggacgagcg
acactggtcaacccgcgcaatggtgccgcgggcagcatccgccagctcgatccggcaatg
acggcggaacggccgttgtccttctatgcctacggcttgggcgaaagccgcggctgggcg
ctgccggcgacgcacggcggcgtactcgatgcgctggccgccttcggcctgccggtgtgc
gagcaccgcgcggtggtgcggggcgccgacggcctgatcgctttccatgcgcgcatccgc
gaggcgcgcgacgcgctgcccttcgacatcgacggcgtggtgtacaaggtcaattcgctg
gcgctgcagcagcagctcggcttcgtcacgcgcgaaccgcgctgggcggtggcgcacaag
tatccggcggaagaggcgctgaccacggtggaggcaatcgaggtacaggtcggccgcacc
ggcgcgatcacgcccgtggcccggctggcgccggtcttcgtcggcggcgtgacggtgacc
aatgccacgctgcacaacgaaggcgaggcgcggcgcaaggatgtgcgcatcggcgatacg
gtggtcgtgcggcgggccggtgacgtgattcccgaggtggtgtcggtggtccttgagcgg
cgacccatgaaggatcttgtggaggcgctgcacgggccatgggaactgctcaaggaatat
ccgacctgtccggtttgtcactccacgatcgaaaagcccgaagacgaggcgatcgcccgt
tgcaccggcggcctgttctgcccggcgcagcgcaagcaggccctgctgcatttcgccagt
cgccgcgcaatggacatcgagggcctgggcgacaaactggtcgagcaactggtagacaat
gccattgtcaagacgccggccgacctctacaagctgggcctgctggccatggtcaacctg
gagcgcatggccgaaaagtcggcaaccaacatccttgcggccatcgaaaagagcaagacg
acgacgctggcgcgcttcatcttcgcgctgggcatccgcaacgtaggcgaggcgacggcg
aaggacctggcgcgccacttcggcaatctggatgcgctgatggcggcggacatcgaccgc
ttgcagcaggtgcccgacgtcggtccggtggtggcggcctcgattgcacgcttctttgcc
gaaccgcacaacgtcgaggtgatcgagcagctgcgtgcggcaggcgtgaactggcccgag
ggcgagccgtcggcagtggcgaactcgccgatcgccggcaagaccttcgtcctcaccgga
acgctgccgacgctgacgcgcgacgaggcgaaggacatgatcgaggcgctgggcggcaag
gtcgccggctcggtgtcgaagaagaccgattacgtggtggccggcgcggaagccggctcc
aagctcgacaaggcgcaggccttgggcgttagcattctggatgagaggcaattcagggag
ttggtgaagacatga

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