Shewanella sp. MR-4: Shewmr4_1629
Help
Entry
Shewmr4_1629 CDS
T00388
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
she
Shewanella sp. MR-4
Pathway
she01501
beta-Lactam resistance
she01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
she00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shewmr4_1629
01503 Cationic antimicrobial peptide (CAMP) resistance
Shewmr4_1629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
she03036
]
Shewmr4_1629
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_1629
01504 Antimicrobial resistance genes [BR:
she01504
]
Shewmr4_1629
Chromosome and associated proteins [BR:
she03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shewmr4_1629
Transporters [BR:
she02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shewmr4_1629
Antimicrobial resistance genes [BR:
she01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shewmr4_1629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
RND-MFP_C
CzcB_C
BSH_CusB
BSH_YknX
Biotin_lipoyl
BSH_YhbJ
Beta-barrel_RND
Peptidase_M23
BSH_LcnD
HH_EMRA
AAA_assoc_C
NQRA_N
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
ABI38705
LinkDB
All DBs
Position
complement(1929855..1930931)
Genome browser
AA seq
358 aa
AA seq
DB search
MEKSKIAKFALPVLLVSMLAACGEEEVAKKEEQYAIPVETTTVLQGNVSSFYSTTATLEA
PQEANVVSRIAGLIEAINVEEGDRVQKGQILAVIDAKRQQYDLDRSEAEVKIIEQELNRL
KKMSNKEFISADSMAKLEYNLQAAIAKRDLAELQVKESHVVSPINGIIAKRYVKAGNMAK
EFGDLFYIVNQDELHGIVHLPEQQLTSLRLGQEAQVFSNQQSKNAIHAKVLRISPVVDPQ
SGTFKVTLAVPNQNAHLKAGMFTRVELKYDTHENVITVPYSALINQDNKQALYVIDGTSA
DHRANRREVEIGYREGDAVEVVSGLKPGEQVVTRGQQNLKDQSLVEVITPLDLASAKN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtcaaaaattgctaagttcgccctacccgtgctgttagtgtcaatgttagcg
gcatgcggcgaagaggaagtggctaaaaaagaagaacaatatgccatccccgtcgaaacc
actaccgtactgcagggtaatgtgtcttcgttttatagcactacggcgaccctcgaagct
ccgcaggaagccaatgtcgtcagccgcattgccggccttatcgaagccattaatgtcgaa
gaaggtgaccgggtacaaaaaggtcaaatcctcgcggttatcgatgctaaacgtcagcaa
tacgatctcgaccgctccgaagccgaagtgaaaatcatcgagcaagagttaaaccgctta
aagaaaatgagcaacaaagagtttatcagtgccgactcgatggccaagcttgagtacaac
ctacaggccgctatcgccaaacgcgatcttgccgaactacaagtcaaagaaagccatgtg
gtctcccccatcaatggcattattgctaagcgttatgtgaaggctggtaacatggcgaag
gagtttggggatctgttttatatcgtcaatcaagacgagctgcacgggattgtgcattta
cccgagcagcaattaactagcctgcgtttaggccaagaagcccaagtctttagtaatcag
cagagtaaaaacgctatccacgcgaaagtattgcggataagcccagtggtcgacccacag
agcggcacctttaaagtgacgttagccgtaccgaatcagaatgcccatttaaaggccggt
atgttcactcgggtcgaattgaagtatgacacccatgaaaatgtaatcactgtgccctac
agcgccctgatcaaccaagacaacaaacaagccctgtatgtgattgatggcacgagcgca
gatcatcgcgccaaccgccgtgaagtcgaaattggttaccgtgaaggcgacgcggtggaa
gtggtctccggcctcaaacccggcgagcaagtcgtgacccgtggccagcaaaatttgaaa
gaccaatccttagttgaagtcattaccccactcgatttggcctcagcgaagaactga
DBGET
integrated database retrieval system
