KEGG   Shewanella sp. MR-4: Shewmr4_3122
Entry
Shewmr4_3122      CDS       T00388                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
she  Shewanella sp. MR-4
Pathway
she00250  Alanine, aspartate and glutamate metabolism
she00330  Arginine and proline metabolism
she01100  Metabolic pathways
she01110  Biosynthesis of secondary metabolites
Module
she_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:she00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Shewmr4_3122
   00330 Arginine and proline metabolism
    Shewmr4_3122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:she03000]
    Shewmr4_3122
Enzymes [BR:she01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Shewmr4_3122
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Shewmr4_3122
Transcription factors [BR:she03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Shewmr4_3122
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: ABI40193
LinkDB
Position
3734367..3737561
AA seq 1064 aa
MEAITMFKASEVLAGRYDSANLDELFKAVTDNYIVDEEQYLSELIKLVPSSDEAIERVTR
RAHELVNKVRQFDKKGLMVGIDAFLQQYSLETQEGIILMCLAEALLRIPDAATADALIED
KLSGAKWDEHLSKSDSVLVNASTWGLMLTGKIVKLDKKIDGTPSNLLNRLVNRLGEPVIR
QAMMAAMKIMGKQFVLGRTMKEALKNSEDKRKLGYTHSYDMLGEAALTRKDAEKYFNDYA
NAITELGAQSYNESESPRPTISIKLSALHPRYEVANEDRVLTELYDTVIRLIKLARGLNI
GISIDAEEVDRLELSLKLFQKLFNSDATKGWGLLGIVVQAYSKRALPVLVWLTRLAKEQG
DEIPVRLVKGAYWDSELKWAQQAGEAAYPLYTRKAGTDVSYLACARYLLSDATRGAIYPQ
FASHNAQTVAAISDMAGDRNHEFQRLHGMGQELYDTILSEAGAKAVRIYAPIGAHKDLLP
YLVRRLLENGANTSFVHKLVDPKTPIESLVVHPLKTLTGYKTLANNKIVLPSDIFGSDRK
NSKGLNMNIISEAEPFFAALDKFKSTQWQAGPLVNGQTLTGEHKTVVSPFDTTQTVGQVA
FADKAAIEQAVASADAAFATWTRTPVEVRASALQKLADLLEENREELIALCTREAGKSIQ
DGIDEVREAVDFCRYYAVQAKKLMSKPELLPGPTGELNELFLQGRGVFVCISPWNFPLAI
FLGQVSAALAAGNTVVAKPAEQTSIIGYRAVQLAHQAGIPTDVLQYLPGTGATVGNALTA
DERIGGVCFTGSTGTAKLINRTLANREGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVS
SSFTSAGQRCSALRVLFLQEDIADRVIDVLQGAMDELVIGNPSSVKTDVGPVIDATAKAN
LDAHIDHIKQVGKLIKQMSLPAGTENGHFVSPTAVEIDSIRVLEKEHFGPILHVIRYKAS
ELAHVIDEINSTGFGLTLGIHSRNEGHALEVADKVNVGNVYINRNQIGAVVGVQPFGGQG
LSGTGPKAGGPHYLTRFVTEKTRTNNITAIGGNATLLSLGDSDA
NT seq 3195 nt   +upstreamnt  +downstreamnt
atggaagcgattactatgttcaaagcgagtgaagtgctggcaggccgctacgattctgcc
aatctcgacgaactgttcaaagccgtcaccgacaactatattgtcgatgaagaacaatac
ttgtcagagctaatcaaactagtgccctccagtgatgaagccatcgagcgcgtcactcgt
cgtgcccacgaactagtcaacaaagttcgtcaattcgataagaaaggtttaatggtaggc
atcgacgccttcctgcagcaatacagcttagaaacacaggaagggattatcctgatgtgt
ttagccgaagccctgctgcgtattcccgatgcggccaccgccgacgccttgattgaagat
aaactctcaggcgcgaaatgggatgaacacttaagcaagagcgattcggttctggttaac
gcctccacttggggcctgatgctcactggcaaaatcgtcaaactcgataaaaaaatcgat
ggtacgccaagcaacctgttaaaccgtttagtgaatcgtttaggtgagcctgtgatccgc
caagccatgatggcggcgatgaagatcatgggtaagcagttcgtacttggccgcaccatg
aaagaagcgctcaagaacagcgaagacaagcgtaaattaggttacacccactcctacgat
atgctgggtgaagctgcgctgacgcgtaaagatgccgaaaaatactttaacgattatgcc
aatgcgattaccgagttaggcgcgcaaagctataacgaaagcgaatcaccacgcccaacc
atttctatcaagctgtcggcgctgcacccacgttacgaagtcgctaacgaagaccgtgta
ctgaccgagctgtatgacacagttattcgcttaattaagttagcccgtggcttaaatatc
ggtatttctatcgacgccgaagaagttgaccgcctagagctgtcgctaaaactgttccaa
aaactgtttaattccgacgccactaagggttggggcttactcggtatcgtggtgcaagct
tactctaagcgcgccctgcctgtgttggtatggttaacccgcctagcgaaagaacaaggc
gatgaaattccggttcgtttagtgaaaggcgcttattgggatagcgagctgaaatgggca
caacaagctggcgaagccgcatacccactctacacgcgtaaggctggtacagacgtgtct
tacttagcctgtgcgcgttatctgttgtccgatgcgacacgcggcgcaatttacccacaa
tttgccagccacaacgcgcaaacggttgccgcgatttccgatatggcgggcgatcgtaac
cacgagttccaacgtctacacggcatgggacaagagctgtacgacactattctgtcggaa
gcgggtgcgaaagcggtacgtatctatgctcctatcggtgcccataaagatctgctgccc
tacttagtgcgtcgcctgctggaaaacggtgcgaacacctcgttcgttcacaagctggtc
gatcctaaaacccctatcgagtctttagtggttcacccactgaaaaccctgacaggctac
aaaaccctggctaataacaaaatcgttttacctagcgatatcttcggtagtgatcgcaaa
aactccaagggactcaacatgaacatcatttcagaagcagagccattcttcgcggcctta
gacaaatttaaatcgacgcagtggcaagcgggccctctggttaatggtcaaaccttaact
ggcgagcacaaaaccgttgttagcccattcgataccacccaaaccgtgggtcaagtggcc
tttgccgacaaagcggctatcgaacaagctgtcgcctctgccgatgctgcgtttgcaact
tggactcgtactcccgttgaagtgcgcgcctcagccctgcaaaagctggcggatctgtta
gaagaaaaccgcgaagaactgattgctctgtgtacccgtgaggctggcaagagcattcaa
gacggtatcgacgaagtgcgtgaagccgtagacttctgccgctactacgcggtgcaagct
aagaagctgatgtcaaaacctgaactgctcccaggcccaacgggtgagttaaacgaactc
ttcctccaaggtcgcggtgtgttcgtctgtatcagcccatggaacttcccattggcgatc
ttcttaggccaagtttcggcagcactggcggcgggtaacactgtcgttgctaaacctgct
gaacagacttcaatcattggttaccgcgcagtgcagttagcacaccaagcgggtattcca
acggacgtgctgcaatatctaccaggcacaggcgctaccgtaggtaacgcgctgacggct
gatgagcgcatcggcggcgtatgttttaccggttcaactggcacagccaaactcatcaac
cgcacactggcaaaccgtgaaggcgcaatcattccgttaatcgccgaaaccggtggtcaa
aacgctatggtggttgactctacttctcagccagaacaagtggttaacgatgtagtatct
tcatccttcaccagtgcgggtcaacgctgctcggcgctgcgtgtactcttcctacaggaa
gatattgcagaccgcgtaatcgatgtactccaaggtgcgatggatgagttagtgattggc
aacccaagttcagtgaaaaccgacgtaggcccagttatcgatgcgaccgcgaaggctaac
cttgacgcccatatcgaccacatcaagcaagttggtaagctgatcaagcaaatgtctctg
cctgcgggtaccgagaatggccactttgtgtcaccaacggccgttgaaattgactcaatc
agagtgcttgaaaaagaacactttggtccaatcctgcacgtgatccgttacaaggcatct
gaacttgcccatgtgatcgatgaaatcaacagcacaggttttggcttaaccttaggtatc
cacagccgtaacgaaggccatgccctcgaagtggctgacaaggttaacgtaggtaacgtg
tacatcaaccgtaaccaaatcggtgcagtcgttggcgtacagcctttcggcggtcaaggt
ctgtcgggcactggtccaaaagccggtggtccacactacttaactcgcttcgtgactgaa
aagactcgcactaataacatcaccgctatcggtggtaacgccacactgttatcactgggt
gatagcgacgcctaa

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