Shewanella sp. MR-4: Shewmr4_3836
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Entry
Shewmr4_3836 CDS
T00388
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
she
Shewanella sp. MR-4
Pathway
she01501
beta-Lactam resistance
she01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
she00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shewmr4_3836
01503 Cationic antimicrobial peptide (CAMP) resistance
Shewmr4_3836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_3836
01504 Antimicrobial resistance genes [BR:
she01504
]
Shewmr4_3836
Transporters [BR:
she02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shewmr4_3836
Antimicrobial resistance genes [BR:
she01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shewmr4_3836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABI40899
LinkDB
All DBs
Position
complement(4578873..4582007)
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPIFAWVIALIIMLAGVLSIRSLPVSQYPSIAPPTVVISANYPGASAKIVEDS
VTQVIEQRMKGIDHLRYIASTSDSFGNASITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ
EVQSQGVNVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANIQDPMSRVPGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSLDVVSAIRAQNAQVSAGQLGGTPSLPGQELNATVSAQSRL
QTPEQFRKIIIKSDTSGANVFLADVARVELGSESYAVESLYNGKPASGIAIKLATGANAL
DTAEAVRAKVEELRPFFPAGLDVVYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPLKKGHGHIETGFFGWFNRGFDRLTNRYESSVAGIVKRSFRV
MMIYAALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTMKVLEKVSDHYMAE
DAVKSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMGVFSQMKEAFV
FAFVPPAVIELGTANGFDMYLQDKSGQGHAKLLEARNQLLGMAAQNPNLVGVRPNGQEDA
PIYQLHIDHAKLSALGIEIANVNSVLATAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQPE
DLDTWYVRNNKGDMVPFSAFATGAWEYGSPRLERFNGLPAMNIQGATAPGFSTGAAMNIM
EDMVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV
VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGSGLIEATL
HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF
FVIVERIFSKREKKGKEEKPTSAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttttttattgatcgccccatctttgcgtgggtgatcgcgttaatcattatg
ttggcgggggtattgtctattcgatccctgccagtctcgcagtaccccagtattgcgcca
ccgacagtggtgatcagtgcgaactacccaggtgcatcggccaaaatcgttgaagactca
gtgactcaggtgattgagcaacgtatgaaaggtatcgaccacctacgttatatcgcatcg
accagtgatagcttcggtaacgcgtctattaccttaacctttaacgctgaggccgatccc
gatatcgctcaggttcaagtacagaacaagttacagggcgcgatgaccttgttacctcaa
gaggtgcaatcgcaaggggttaacgttaacaagtcaagttctggcttcttgatggtactg
ggcttcgtctcgaccgacggttctttggacaagggtgatatcgccgactatgtgggcgct
aacatccaagatcctatgagccgtgtaccgggcgtgggcgaaattcagttattcggcgcc
caatacgcgatgcgtatatggttagatccactgaaactgacccaatacaacctcaccagt
ttagatgtggtgagcgccattcgtgcgcaaaacgcgcaggtttctgcgggtcaactcggt
ggcacgccatcgctgccgggacaagagctaaacgcgacagtatcggcgcagagccgcctg
caaacgcctgaacagttccgcaagatcatcatcaaatccgatacttcgggtgcgaacgtg
ttcttggctgatgtggcgcgtgtcgaactgggctcagaaagctatgcagtagagtctctc
tacaacggtaaacccgcttctggtattgcgattaaactggctaccggtgctaacgctctg
gataccgcggaagcggttcgcgctaaagttgaagagttacgtcccttcttccctgctggg
ttagatgtggtttacccctacgatacaacgccattcgttgagaaatcgattgaaggcgta
gtacacactctgctggaagcgatcgtactggtgttcgtcatcatgtacctcttcctgcaa
aacttccgtgcgaccttaattccaacgattgctgtgcctgtggtattgctgggtaccttt
gcgattctgtcggcaacgggcttctccatcaacaccctcaccatgtttgctatggtgctg
gcgattggtctcctcgtggacgacgcgattgtggtggtggaaaacgttgagcgggttatg
gccgaagagggcctaagtccactcgaggcgacccgtaagtcgatggatcagatcactggc
gcgttagtcggtatcggtctgacactgtcagcggtattcgtacctatggcgtttatgtcg
ggttctaccggggttatttatcgtcagttctcgatcactatcgtctctgcgatggcgctg
tctgtactggtggccttgatcttaacgcctgcactctgtgcgaccatgttgaaaccgttg
aagaagggccacggtcatatcgaaacgggcttctttggctggtttaaccgtggcttcgat
cgcttaactaaccgttacgaatcgagcgttgcgggtattgtgaagcgtagcttcagagtc
atgatgatctatgcagccttagtcgtggctgtgggctggattttcatgcgcatgccaacg
gcattcttacctgacgaagaccaaggtatcttgtttacgcaggcgattttgccaaccaac
tctacccaagaaagcaccatgaaagtgttagagaaagtctctgatcactacatggcagaa
gatgccgttaaatcggtattcagcgtggcgggcttcagtttcgcgggtcaaggccaaaac
atgggtattgccttcgttggcttgaaggattggtcagagcgtgaagcgccgggtatggat
gtacagtccattgctggccgtgctatgggcgtattcagccaaatgaaagaagccttcgta
ttcgccttcgtaccgccagcggtaatcgagttgggtacggcaaacggtttcgatatgtac
ctgcaagataagagtggccaaggacacgctaagttactcgaggcgcgtaaccaattgctg
ggtatggcagcacagaatccaaacctagtaggcgttcgtccaaacggtcaggaagatgcg
ccaatctatcagttgcatatcgaccatgccaaactgagtgccttaggcattgagattgcg
aacgttaacagcgtactcgcaaccgcatggggtggttcttatgtaaacgactttatcgac
cgcggtcgtgtgaagaaagtttacgtacagggcgatgctcaataccgtatgcaacctgaa
gacttagacacttggtacgtgcgtaacaacaagggcgacatggtgccattctcggccttc
gcgactggcgcatgggaatatggttcacctcgtctagaacgtttcaacggtttacctgcc
atgaacattcaaggcgcaacggctcctggtttcagtaccggtgcggcgatgaatatcatg
gaagatatggtgaaacagttaccacctggctttggtatcgagtggaacggcctatcctat
gaggaacgtttatcgggtaaccaagcgccagcgctgtatgccctgtcgattctagtagtg
ttcctagtattggctgcactgtatgaaagctggtccgtaccgttcgcagtaatcctagtg
gttccgctcggtattatcggtgccttgctggcgatgaatggtcgtggcttgccaaatgac
gtgttcttccaggtaggtctgttgacgacggtcggtttggcgacgaagaacgccatcttg
attgtggaattcgccaaagaattctatgagaaaggttcgggtcttatcgaggcgacctta
catgcggtacgtgtgcgtttgcgtccaattctgatgacgtcactcgccttcggtctgggt
gtggtaccgttagcgattagtacgggtgtaggttctggtagccagaacgccatcggtact
ggtgtactcggcggtatgatgagttcgaccttcttaggtatcttcttcgtgccgttgttc
ttcgtgattgtggaacgtatcttcagtaagcgcgagaagaaaggtaaagaagaaaagccg
acctcggcagagtaa
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