Shewanella sp. MR-4: Shewmr4_3837
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Entry
Shewmr4_3837 CDS
T00388
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
she
Shewanella sp. MR-4
Pathway
she01501
beta-Lactam resistance
she01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
she00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shewmr4_3837
01503 Cationic antimicrobial peptide (CAMP) resistance
Shewmr4_3837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
she03036
]
Shewmr4_3837
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_3837
01504 Antimicrobial resistance genes [BR:
she01504
]
Shewmr4_3837
Chromosome and associated proteins [BR:
she03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shewmr4_3837
Transporters [BR:
she02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shewmr4_3837
Antimicrobial resistance genes [BR:
she01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shewmr4_3837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_EMRA
BSH_CusB
HH_AAEA_pHBA
Beta-barrel_RND_2
HH_CyaD
HH_CzcB
HH_YBHG
BSH_CzcB
DUF5801
GPS2_interact
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
ABI40900
LinkDB
All DBs
Position
complement(4582017..4583165)
Genome browser
AA seq
382 aa
AA seq
DB search
MRQTIKLASVISVALWMAACSPQEDKAAHGGAGPQSIEVGVINVAAKPQVIQVELPGRSK
AFLEAEVRPQVNGIITKRSFVEGGNVKQGESLYQIDSAPYKAALVSANADLARANASLAS
AKAKAARYQQLVKTNAISKQDFDEAEAAYKEALASVTVAEAAINTAKINLEYTEVLAPIS
GRIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLKQGKLQAADNA
DVQLVLEDGTVYGHNGKLQFAEVSVDENTGSVILRAEFPNPDGILLPGMYVRAVLNTGTD
PQAILVPQKAISRNAKGQAVAMVVNDQGVVEAKIVTTAEVIDNQWRITAGLEAGDKLIVE
GLQKIRPGAPVTPKVISETQAQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagacaattaaacttgcctcagtaatcagcgtggcgttgtggatggcagcttgt
agccctcaagaggataaagccgctcatggcggcgcagggccgcagagcatagaagttggg
gtaatcaatgtggcggctaagcctcaggttatccaagtcgaattaccaggccgtagcaag
gcgttcctcgaagccgaagtgcgtcctcaagtgaatggcatcattaccaaacgtagtttt
gttgaaggcggcaatgttaagcagggcgagtccctctatcaaattgattcagcgccttac
aaagctgcactcgtgagcgcgaatgccgatttagccagagcgaatgcaagtcttgcttct
gccaaagcaaaagccgctcgttatcagcagttagtgaagactaacgctatcagtaaacag
gatttcgacgaagctgaagcggcttacaaagaagcgctggcgagtgtcactgtcgctgaa
gctgccatcaacaccgcgaaaatcaacctcgaatacaccgaagtgttagcgcctatttcc
ggccgtatcggtaaatcgagtgtgacagcgggtgcgctagtaacggctaaccaaagccaa
acattggcgaccattcaacagctcgatccaatcaatgtggatatcgcccagtcaagtgct
caactgttacgcctaaaagccaagttgaagcaaggtaaactgcaggcggccgataatgct
gacgtgcagttagtcttagaagacggcactgtttatggtcacaacggtaagttgcaattt
gccgaagtgagcgtggatgagaacactggctcagtgatcctgcgtgcagagtttccgaac
cccgatggcatcttattgcctggcatgtatgttcgcgccgtattgaataccggtaccgat
cctcaagccattttggtgccgcaaaaggccattagccgaaatgcgaagggacaagctgtg
gctatggtggtgaacgatcaaggcgtagttgaagcaaaaattgttaccacagctgaagtt
atcgacaatcaatggcgtattactgcaggtttggaagcgggcgataagttgattgtggaa
ggattacaaaagatccgtccaggtgcaccagtcactcccaaagttatttctgaaacccaa
gcacaatag
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