Shewanella sp. Arc9-LZ: GUY17_11635
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Entry
GUY17_11635 CDS
T10509
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GUY17_11635 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shea03400
]
GUY17_11635 (nth)
Enzymes [BR:
shea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GUY17_11635 (nth)
DNA repair and recombination proteins [BR:
shea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GUY17_11635 (nth)
Prokaryotic type
GUY17_11635 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
TAZ1_RBM
Motif
Other DBs
NCBI-ProteinID:
QHS13719
UniProt:
A0AAE6VT46
LinkDB
All DBs
Position
2716458..2717090
Genome browser
AA seq
210 aa
AA seq
DB search
MNKDKRQQILNRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
PQAIYDLGVDGLKQYIKTIGLYNNKAVNVINACKMLVDLHGGEVPENREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVDQVELNMLKVVPSEFKVDVHHWFI
LHGRYTCLARKPRCGSCIIEDLCEFKDKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagataagcgacaacaaatactcaacagattaagagacaataatcctaagcct
gaaactgaactgaacttttctagtccatttgagttattagttgctgtcacgctatcagca
caagcaaccgatgtcagtgtcaacaaggcaactgataagttgtttcctgttgccaatacg
cctcaagcaatctatgacttaggcgttgatgggcttaagcaatacatcaaaaccattggc
ttatacaataacaaagccgttaatgtgattaacgcctgtaaaatgctggttgatttacat
ggtggcgaagtacccgagaatcgagaagcattagaagctttacctggagtgggacgaaaa
acggccaatgtagtactcaataccgcctttggctggcccactattgccgttgacacgcat
atttttcggctagcaaatcgaactaagtttgctcccggcaaaaatgtcgaccaagttgaa
ctgaatatgcttaaagtggtgccgagcgagtttaaagtggatgtacatcattggtttatt
cttcacggacgttacacttgcttagccagaaaaccccgttgcggttcttgtattatcgaa
gacctgtgtgagtttaaagataaaactgaatag
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