Shewanella sp. Arc9-LZ: GUY17_19715
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Entry
GUY17_19715 CDS
T10509
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00540
Lipopolysaccharide biosynthesis
shea01100
Metabolic pathways
Module
shea_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GUY17_19715 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shea01005
]
GUY17_19715 (lpxC)
Enzymes [BR:
shea01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
GUY17_19715 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
shea01005
]
Lipid A
GUY17_19715 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QHS15161
UniProt:
A0AAE6SVV5
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All DBs
Position
complement(4586531..4587451)
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AA seq
306 aa
AA seq
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MIFQRTVQKMVKSTGVGLHSGNKVTLCIMPAPVNTGIVLKRTDLSPAVSIPAKADMVRET
TMCTALVNDAGIRISTIEHLFAALAGLGIDNAIIEVDAPEIPIMDGSASPFVFLLQSAGI
KEQAAAKKYLKIIKPVRVEDGDKWAELKPFKGFRVDFRIDFDHPEIARSQQHMVMDFSTS
AFVKDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAIVGEFSAYKTGHALNNQLVRALLAQQDAWELVSFDKEADVPVSFMVP
GALAHV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcaaagaactgttcaaaaaatggtgaagagcactggggtcggattacattcc
ggcaacaaagtgactctatgcattatgcccgcaccagtgaatacagggattgtactaaaa
cgtaccgatcttagccctgctgtgtctatcccagccaaagctgatatggttcgtgaaacc
acaatgtgtaccgcccttgtaaacgatgctgggattagaatatcaaccattgagcatttg
tttgcggcacttgccggcttaggcatcgataatgcaattatcgaagtcgatgcaccagaa
atcccgattatggatggcagtgcaagcccatttgtgttcttactgcaaagtgcaggaatt
aaagaacaagctgcagctaaaaaatacctaaaaatcatcaaacctgtgcgtgttgaagat
ggcgataaatgggctgagttaaaaccttttaaaggctttagagttgattttagaattgac
tttgatcatccagaaattgctcgtagtcaacaacacatggtgatggacttttcgacatca
gcgtttgtgaaagacattagtcgtgccagaacatttggttttatgcgagatattgaatac
ctacgtgcgaataatcttgcactaggtggcagcatggaaaatgccgttgtacttgacgaa
tatcgtgtattaaaccctgatggtctgcgttatgaagacgaattcgttaagcataaaatc
ctcgatgcatttggtgacttatatgttgctggtcatgccatcgtcggcgaattttcagct
tataaaactggtcatgcgttaaacaaccaacttgtgcgtgcattacttgctcagcaagat
gcgtgggagttggtaagctttgataaagaggctgatgtgcctgtcagcttcatggttcca
ggtgcgttagcgcacgtttaa
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