Shewanella sp. H8: ABIS04_14810
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Entry
ABIS04_14810 CDS
T10623
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00270
Cysteine and methionine metabolism
sheh00450
Selenocompound metabolism
sheh00670
One carbon pool by folate
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
sheh01230
Biosynthesis of amino acids
sheh04981
Folate transport and metabolism
Module
sheh_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ABIS04_14810 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ABIS04_14810 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABIS04_14810 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ABIS04_14810 (metH)
04980 Cobalamin transport and metabolism
ABIS04_14810 (metH)
Enzymes [BR:
sheh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
ABIS04_14810 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
XBJ47733
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Position
3422115..3425831
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AA seq
1238 aa
AA seq
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MAKSTSYSQTLKQLNALLAQRIVILDGAMGTMIQDYKLEEEDYRGERFKDWHCDVKGNND
LLVLSQPQIIKDIHTQYLLNGADIIETNTFNATTIAMADYDMQSLAAEINLAGARVARQA
ADEVAAQTGSPRYVAGVLGPTNRTCSISPDVNDPGFRNVSFDQLVEAYVESTSALIEGGA
DIIMVETIFDTLNAKAALFAIEKVFDQLGDRLPVMISGTITDASGRTLTGQTTEAFYNSL
RHIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEEMAEVI
NQWAQEGMLNIVGGCCGSTPAHISAIREAVLRHEPRQIPDLPVACRLSGLEPLTIDKNSL
FVNVGERANVTGSAKFLRLIKEEKFEEALDVVREQVENGAQIIDVNMDEGMLDGVASMAK
FLNLIASEPDISRVPIMIDSSKWEVIEAGLKCVQGKSIVNSISMKEGEAKFIEQATLVKR
YGAAAIVMAFDEDGQADTRERKTQICTRAYRILVDVVGFPPEDIIFDPNIFAIATGIDEH
DNYAVDFIEAIKDIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMG
IVNAGQLAIYDDIDPELKKRVENVVQNLPCPVADSSNTEQLLDIAESFRGDGSQVAKKED
LAWRSWPVSKRLSHALVKGITEFIDEDTEAARLEAVRPLDVIEGPLMDGMNVVGDLFGAG
KMFLPQVVKSARVMKKAVAYLNPYIELEKVAGQSNGRILMVTVKGDVHDIGKNIVGVVLA
CNGYEVVDLGVMVSVDKILDAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAI
IGGATCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLINNETRQATIDEAYVEYDMMR
EKRLSQTKRKTIVSIEDSRENRCKHDWENYTPFTPNVLGRQVFDDYPLEDLVARIDWTPF
FRSWELHGHYPELLKDKVVGEEAVKLFADGQAMLKQIIAEKWLTAKAVIGLFPANTVNHD
DIELYTDESRTTLEMTTHHLRMQLERVGNDNFCLSDFVAPKDSGVADYMGGFAVTTGHGI
DEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEVLDNEALIRER
YKGIRPAPGYPACPDHTEKGLLWDLLKPDETIDLNITESFAMYPTAAVSGWYFAHPKSRY
FGVTNIGKDQVEDYAKRKGMTLEETERWLAPILDYDPE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgacttcttacagtcaaactcttaaacaacttaacgcattgttagcgcag
cgtattgtgattttagatggcgctatgggcaccatgatccaagactataagttggaagaa
gaagattatcgtggcgagcgttttaaagattggcattgcgatgttaaaggcaacaatgac
ttattagtactcagccaaccgcaaatcattaaagatattcatactcagtacctgttaaac
ggtgccgacattattgaaaccaacacctttaatgccaccaccattgccatggccgactac
gatatgcagtcactggccgctgaaattaaccttgctggcgcccgagttgctcgccaagca
gcagatgaagtagcagcacaaactggttcaccacgttatgttgccggtgtattaggccca
accaaccgtacctgttctatcagcccagacgttaacgacccagggtttcgtaatgtcagt
ttcgatcaattagttgaagcctatgtcgaatcaaccagcgccttaattgaaggcggcgcc
gatatcattatggttgaaaccatttttgataccttaaatgccaaggccgcgctatttgcg
attgaaaaagtattcgatcagcttggcgatcgcttacctgtcatgatttctggcactatt
accgacgcctcaggccgtacactaaccggccaaacaaccgaagccttctataactcttta
cgccacatcaagccgttatcgattggccttaactgcgccctaggaccaaaagagttacgc
ccgtacgttgaagaattgtcacgtattgccgaatgctatgtctctgcccaccctaatgct
ggcttacccaacgaatttggcggctacgatgaaaccccagaagaaatggccgaagtcatt
aatcaatgggcgcaagaaggcatgctcaatattgtcggcggctgttgtggcagtacacca
gctcacattagcgccatccgagaagcagtactcagacacgaaccaagacagatcccagat
cttccagtcgcgtgtcgtttatcgggcctagagccactcaccattgataaaaactcgtta
tttgtgaatgtcggcgagcgcgcaaacgtgactggttcggccaagtttttacgcttaatt
aaagaagaaaagttcgaagaagcgttagatgtcgtgcgcgagcaggttgaaaacggcgcg
caaattatcgacgtcaacatggacgaaggtatgctcgatggcgtggcgtctatggcgaag
tttttaaacttaatcgcctctgagcccgacatctctcgcgtgccaatcatgattgactca
tcaaaatgggaagtgattgaagccggccttaaatgcgttcaaggcaagtcgattgtaaac
tctatttcgatgaaagaaggcgaagccaaatttatcgaacaagccaccttagtgaaacgc
tatggcgctgccgccattgtcatggcctttgacgaagacggccaagccgatacacgtgaa
cgtaaaacccaaatttgtacccgtgcttatcgtattttggtcgatgttgtcggctttcca
ccagaagacattattttcgaccccaatatcttcgccattgccaccggtattgatgaacac
gacaactatgcagtcgactttatcgaagccattaaagacatcaaagccaccttgccacac
gcgatgatctccggtggcgtgtctaacgtgtcattctcgttccgtggtaacaacccagta
cgcgaagctattcacgcggtgtttttataccatgccattcaagcaggcatggacatgggt
attgttaacgcaggtcagttagccatatacgatgatattgacccagagctcaaaaaacgg
gttgaaaacgtagtccaaaacttaccttgcccggttgccgactcaagtaacaccgaacaa
ctactcgacatcgctgaaagctttagaggtgatggctcacaagtggccaaaaaagaagat
ttagcctggcgcagttggccagtatctaagcgtttatcccatgccttagttaaaggtatc
accgaatttattgatgaagatactgaagctgcccgcctagaagccgtgcgccctctcgat
gttatcgaaggaccattaatggatggcatgaacgtggttggcgacttatttggcgcgggc
aaaatgtttttaccccaagtggttaaatcggctcgggtaatgaaaaaagccgtggcttat
cttaatccatatattgagcttgaaaaggttgccggtcagtcaaacgggcgaattttaatg
gtcacggtaaaaggtgatgttcatgacatcggtaaaaatatcgttggtgtagtactcgct
tgtaacggctacgaagtggtcgatcttggggtgatggtatcggtcgataaaattctcgat
gcagtaaaagagcacaatattgacattatcggcatgtcaggtcttattacaccaagtctt
gatgaaatggtacataacgtgaaaaccttccaccgtgaaggcttaaccatccctgctatt
atcggcggtgcaacctgctctaaaattcatactgcagtaaaaatagctccgcattatcca
cacggtgccatttacattgccgatgcctcgcgcgccgtgcctatggtgtcaaaactgatt
aacaacgaaacacgccaagcgaccattgacgaagcttacgttgaatacgacatgatgcgt
gaaaaacgtttatcacaaactaagcgtaaaaccatagtgtcgatagaagattcgcgcgaa
aaccgttgtaaacacgactgggaaaactacactccatttacgcctaacgtgttaggtcgc
caagtgtttgatgactacccactagaagacttagttgcacgtatcgactggacaccgttc
tttagaagctgggagctgcacggtcattacccagaacttttaaaagacaaagtggtaggc
gaagaagcggttaaattatttgccgatggccaagctatgttgaagcaaattattgctgaa
aagtggcttaccgccaaagcagtgatcggtttattcccagccaataccgtcaaccatgac
gacattgaactgtataccgatgaaagccgcaccacattagaaatgaccactcatcatttg
cgtatgcagcttgaacgtgtcggtaacgacaacttttgtttatctgactttgttgcacca
aaagattcaggcgttgctgattacatgggcggttttgcggtaacgacggggcatggaatt
gatgaacatgttgcccgctttgaagccaatcacgatgactacaacgcgattatgcttaaa
tgcttagcagaccgtttagccgaagcttttgccgagcgtatgcacgaacgtgttcgtaaa
gagttttggggttatgccgcagatgaagtgctcgacaatgaagcgttaattcgtgagcgt
tataaaggcattcgcccagcaccaggttaccctgcatgtccagaccacaccgaaaaaggt
ttgttatgggacttactcaaacccgatgaaactatcgatttgaacatcaccgaaagcttc
gccatgtacccaaccgctgcggtctctggctggtactttgctcatcctaaatcgcgctat
tttggcgtgaccaatattggtaaagatcaggtagaagactacgctaagcgtaaaggcatg
acattggaagagactgaacgatggttggcaccaatattggactatgatccagaatag
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