Shewanella sp. H8: ABIS04_17885
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Entry
ABIS04_17885 CDS
T10623
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sheh Shewanella sp. H8
Pathway
sheh01501
beta-Lactam resistance
sheh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABIS04_17885
01503 Cationic antimicrobial peptide (CAMP) resistance
ABIS04_17885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_17885
01504 Antimicrobial resistance genes [BR:
sheh01504
]
ABIS04_17885
Transporters [BR:
sheh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABIS04_17885
Antimicrobial resistance genes [BR:
sheh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABIS04_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
XBJ48298
LinkDB
All DBs
Position
4107582..4110644
Genome browser
AA seq
1020 aa
AA seq
DB search
MFNYFYHRSYLTFALIIALFIIGVMGLISMPKNLFPDSDRPTIIVITQISGATAKVAAST
VSKPIEEEISRLAMIREVSSVNVANFSIVKGEFEYEKGLDAAAVDVNNALSIASSKLPAG
ANPAIYTSGAFTRPVEVITLSSKNSNLTLPDLRKIADSFIKPYLLSKPDIGNVEVFGGYQ
SAINIELDPLKAKKYGLDFNKVANVITATNKDMPLGFLKGKNGFFTLTYYGDHADIDSVK
NIFVAPNVHLKDIAKVKWGYQKRFSGYMGNGKEGIAMAVQRTPGGSVLDVSKATRTELEK
LKVQYPNIEFQISDTQRDLIETANDNMLEALRDAVIYTLIVMMFFLGNFRAIIAAGLSIP
LVFFGTIAIIYLFGGELNIVVYTAIILALGMLVDDAVVVLENIERHISEVKEDLNTAIEE
GTKEVLSPIFSGTVATIVIMFPLMFVGDFPQHIFRPLISTLIIALLVSYFLSITFIPKLS
LYLYKNGTQKNRIEKFFERLYQASFGRLVAPYISILHFTNGRYAVWRKLLLTVGVLALLI
ISVSNIMPIIGKDTMPPMDTGIIKAHIVFSANDRVEDSEAKMKPFLTWLHQQPEVTMSSV
AFGSETGVLSLGSGNLPSEAIITINCVNRFQRKKSLWTIEDEIRDQLHTLSGIKTVEVYD
FGATPMSSIKAPLDVRITSSDFENLPEMAEKVAQALAPIKGLTSITQSWASDFNELKVDI
DTNKALSYGLTPAAIAEQIPINGRILSMSGSLSSMSTQYVRLYLKGSFSEDIQSLKSMLI
QTPAGDELPLTALATISNNLTQAKIERDQMLYSIDVNGFRTTRPVTHITSDAIEALKTVN
TAGYNVTQQGDIISLNDSFTRMIKAIATGIVILTITLIVIYRSVGLGLIMIVVLPLSLIG
ASWGMLLFDKPSCMPSLIGILLLFGIIIKNAVLLVDFYQDFRKKESPFESAVESVRVRFR
PVMMTAFGTIAGMIPIALEQAVGLERLSPLADVAIGGLIVGTLLTLVYVPMFAYGFDRDK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatttttatcaccgttcttacctgacttttgcactgattatcgctttgttt
attatcggcgtaatgggattaatttccatgccgaaaaacctattcccagattcagatcgt
cctaccattatcgtcatcacacaaatctcaggcgccacagcaaaggttgcggcatcaacg
gtctccaaacccatcgaagaggagatatctcggcttgcaatgatccgcgaagttagctcg
gttaatgtggcaaacttttctattgttaaaggtgagtttgaatatgaaaaaggattagat
gctgctgcggttgatgttaacaatgcactatcgatagcaagcagtaaattacccgctggc
gcaaacccagcaatttatacttctggtgcttttactcggcctgtcgaagtgattacatta
tcttcaaaaaacagtaatttgaccttacccgatttacgtaaaatagccgacagctttata
aagccttatcttctaagtaaacctgatattggtaatgtagaagtttttggtggctatcaa
agtgcgattaatatcgaacttgacccacttaaagctaaaaaatatggtttagattttaac
aaagtcgccaatgttattactgccacaaacaaagatatgccgctagggtttcttaaaggt
aaaaatggctttttcactctgacctattacggcgatcatgccgatattgatagtgtaaaa
aacatatttgttgcgcctaatgttcatttaaaagatattgccaaagtcaaatggggttac
caaaaacgctttagtggttatatgggtaacggcaaagaaggtatcgccatggcagtgcaa
cgaactcccggtggcagtgtactcgatgttagcaaggcgacacggaccgaacttgaaaaa
ctaaaagtacaataccccaatatcgaatttcaaattagtgatactcaacgcgacctcatc
gaaaccgcaaacgataatatgctggaagcattacgtgatgccgttatttataccctgatt
gtaatgatgttttttctcggtaacttccgtgcaattattgctgcaggcttatcgatccca
ctggtcttttttggcaccatagcaattatttacttattcggtggagagctgaatattgtg
gtctataccgccatcatcttagcactcggcatgttggtggatgatgcagttgtggttctt
gaaaatatcgaacggcatataagcgaggtcaaagaggatttaaacaccgcgattgaagaa
ggtaccaaagaagttctgtctccgatattttccggcaccgtcgcgaccatcgtaatcatg
tttccgctgatgtttgtcggtgatttcccgcagcatatctttagacccttaatatcaaca
ctgatcatcgcactgctcgtttcgtattttctatcaataacctttattccaaaattatcg
ttatacctctataaaaatggtactcaaaaaaatcgtatcgaaaaattttttgaacgactt
taccaagcctctttcgggcgcttagtcgccccttatatcagtattctgcattttaccaat
ggccgttacgcagtgtggcgcaaactattgttaaccgtcggtgtactggccttactgatt
attagtgtgtcaaacattatgcccattatcggcaaagacactatgccgccgatggacact
gggattatcaaagcccacattgtcttcagcgccaatgaccgcgtagaagactcagaagcc
aaaatgaaaccctttttaacttggttacatcagcaaccagaagtcaccatgagttcagtc
gccttcggttctgaaacaggggtattatcattaggcagtggtaatttaccaagtgaagcc
atcatcaccattaactgcgtcaatcggttccaacgcaaaaaatccctatggactatcgaa
gatgaaatccgcgatcaattacacaccttatcaggcattaaaaccgtcgaagtttatgat
tttggtgcaacgcctatgagttcgattaaagcgccactggacgttcgtatcacatccagt
gattttgaaaacttacccgaaatggccgagaaagttgcacaagcactggcgcctataaaa
ggattaaccagtattacccaaagctgggcaagtgattttaatgagttaaaagtcgatata
gataccaataaagcactgagttatgggctaacacctgcagccattgccgaacaaataccc
atcaacggtcggatattatcaatgagcggcagcttatcatcaatgtcaactcagtacgtt
cgcttgtaccttaaaggaagttttagtgaggatatccaaagtctaaaatcgatgttgatc
caaacacccgctggtgatgaattaccgctaacagcattagcgacaatcagtaataatctg
acccaggcaaaaatagaacgtgaccagatgttatacagcatcgatgttaatggattccgc
acaacccgtccggtaactcatattactagtgatgccatcgaagcactaaaaactgtgaat
acagctggttacaacgttacccagcaaggcgacattatatccttaaatgacagttttacc
cgtatgatcaaagctatcgcaacaggtatcgttattttaaccatcacacttatcgtcatt
tatcgctcagttgggctcggcctaatcatgatagtggtcttgccactatccctcatcggc
gcctcatggggcatgttattgtttgacaaacccagctgtatgccaagcttaatcggtatc
ttactgctgtttgggatcatcattaaaaacgcagtattactggtcgatttctatcaagac
tttaggaaaaaagaatcgccatttgaaagtgccgttgaaagtgtccgtgtccgattccgt
ccggtaatgatgaccgcttttggcaccatagccggtatgatccctattgcactagaacaa
gccgttggcctagaacgtttatcaccactggcagatgtcgccatcggcgggcttatagta
ggtaccttactcaccctagtgtatgtaccaatgtttgcatacggattcgatagggataaa
taa
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