Shewanella sp. JNE2: MZ182_11415
Help
Entry
MZ182_11415 CDS
T08546
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shej
Shewanella sp. JNE2
Pathway
shej01501
beta-Lactam resistance
shej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MZ182_11415
01503 Cationic antimicrobial peptide (CAMP) resistance
MZ182_11415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shej02000
]
MZ182_11415
01504 Antimicrobial resistance genes [BR:
shej01504
]
MZ182_11415
Transporters [BR:
shej02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MZ182_11415
Antimicrobial resistance genes [BR:
shej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MZ182_11415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UPO29667
LinkDB
All DBs
Position
2553791..2557042
Genome browser
AA seq
1083 aa
AA seq
DB search
MSIISTSVKRPVTVWMFMLAVILFGMVGFSRLAVKLLPDLSYPTLTIRTTYDGAAPVEVE
QLVSKPIEEAVGVVKGLRKISSISRSGMSDVVLEFEWGTTMDMASLDVREKLDTIALPLD
VKKPLLLRFNPNLDPIMRLALSVPNVSEAELKQMRTYADEELKRRLEALSGVAAVRLSGG
LEQEVHILLNQEKLSQLNLNADDIKRRINEENINLSAGKVIQGDREYLVRTLNQFNSLEE
LGQVIVYRDEQNLVRLFEVATISDAYKERSDITRIGSQESIELAIYKEGDANTVAVAKKL
RDELAKINQDPKQNKLEVIYDQSEFIESAVSEVTSSALMGSVLSMLVIYLFLRNIIPTLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAIGLLVDNAIVVLENIDRCRSEGMSKL
DAAVTGTKEVAGAIFASTLTTLAVFIPLVFVDGIAGALFSDQALTVTFALLASLLVALTS
IPMLASREGFSTLPALIKTEPKNKPTTKMGKLKHYSATVFSFPILLIFSYLPSAALTLVL
ILGRLFSWLIGLVMRPLSSAFNFIYHGIEKVYHTLLASALRQQKITLLLTIALTGACISL
LPRLGMELIPPMNQGEFYVEILLPPGTAVSETDKVLQQLALSIKDKTEVKHAYSQAGSGG
LMTSDTARGGENWGRLQVVLNDHSAYNAITQVLRDTARRIPELETKIEQPELFSFKTPLE
IELTGYDLQLLKRSADNLVKALAVSDRFADVNTSLRDGQPELSIRFDHARLAALGMDAPM
VANRIAQRVGGTIASQYTVRDRKIDILVRSELAERDNISDIDALIINPNSSHPIALSAVA
EVSLQLGPSAINRISQQRVALVSANLAYGDLSDAVATAQDILSQQVLPASVQARFGGQNE
EMEHSFQSLKIALILAIFLVYLVMASQFESLLHPLLILFAVPMALGGSILGLYLTQTHLS
VVVFIGLIMLAGIVVNNAIVLVDRINQLRSEGVQRLHAISVAAKSRLRPIMMTTLTTTLG
LLPMALGLGDGSEVRAPMAITVIFGLSLSTLLTLIVLPVLYALFDRKTYAVTDSHVSVEE
ARP
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattattagcacctcggttaagcggccagtcacagtatggatgtttatgctggca
gtaatcttattcggaatggtcggtttttctcgcttggctgtgaaattacttcctgactta
agctatccaaccctcacgattcgcactacctatgatggtgctgcgcccgttgaagtagag
cagctggtctccaaacctattgaggaagcagttggtgttgttaagggcctacgaaaaatt
agctctatttcccgttcaggcatgtcggacgttgtgcttgaatttgaatggggtaccact
atggatatggcaagtttagatgtacgtgaaaagctcgacactattgccctaccactcgat
gttaaaaaaccactcttactgcgctttaacccaaatcttgaccccatcatgcgccttgca
ctgtcagtgccaaacgtctctgaagccgagcttaaacaaatgcgtacctatgccgatgaa
gagctcaaacggcgcttagaagcactttcaggagtggctgcggtacgcttatctggcggt
ctagagcaggaagtacacattctgctcaaccaagagaaactgtcgcaacttaatcttaat
gccgatgatattaaacgtcgcattaacgaagaaaatattaacctctctgcgggcaaggta
atccaaggtgatcgtgaatacttagtacgaacacttaaccaattcaattcattagaagag
ttgggccaagttatcgtttatcgtgatgaacaaaatttagtacggctgtttgaagtggca
actatcagtgatgcctataaagagcgcagcgatatcactcgcattggtagccaagaatct
attgaattagccatttataaagaaggtgatgccaataccgtagccgttgccaaaaaatta
cgcgatgaactggctaaaatcaatcaagaccccaagcaaaataaacttgaggtgatttac
gatcaatctgagtttatcgaaagtgcggtcagtgaagtcacctcttcggccctaatgggc
agcgtattatctatgttggttatctacctctttttacgcaatattataccaacactgatt
atttctatctcgatccccttctctgttatcgcgacctttaacatgatgtatttcgccgat
atcagcttaaacattatgtcattaggcgggatcgctctcgccattgggttactggttgat
aatgccattgttgtactagaaaacatcgaccgctgccgcagtgaaggcatgagtaagcta
gacgcggcagtaacgggcaccaaagaagtggccggtgcaatttttgcttcaacactcacc
acattggcggtgtttataccattggtgtttgttgatggaatagccggagcattattctcg
gatcaagccttaacagtcacttttgcactattggcctcgctattggtcgccttaacatcc
attccaatgttggcatctcgggaaggctttagcaccttgccagcattaataaaaactgag
ccgaaaaacaaacccaccaccaaaatgggcaaactaaaacactacagtgcgacagtgttc
tccttccctattctattaatttttagctacttaccaagtgcagcgctcaccttagtgcta
attttaggccgcttattctcatggctaatcggtttagtaatgcggcctctaagctcggct
tttaattttatataccacggtattgagaaggtgtatcacacactattagcctcggcacta
cgccaacaaaaaataactctgttactgaccattgcgctcacaggtgcatgcattagtttg
ttaccacgccttggtatggaattgatcccccccatgaatcagggtgagttttatgtggaa
attctactcccccccggaacggcagtcagtgaaacggacaaggtattgcagcaacttgcg
ctatcgattaaagacaaaacggaagtcaagcatgcctatagtcaagcgggcagtggcggc
ttaatgacctcagatactgcccgtggtggcgagaactggggacgtttacaagtcgtactt
aacgatcacagtgcctataacgccatcactcaagtgctacgtgataccgcgcgccgtatt
cctgagcttgagaccaaaatcgagcaacctgagttatttagctttaaaacaccgcttgaa
attgaactcacaggctatgatttacagttactcaaacgcagtgcagataatctggttaaa
gccctcgcagtttcagatcgttttgccgacgtcaataccagtctgcgtgatggtcaaccc
gaattgagtattcgctttgatcatgctcgcttagctgcgctaggcatggacgcgcctatg
gttgcaaatcgtatcgcccaacgtgtaggtggtaccattgccagccaatacacagtgcga
gaccgtaagattgatattctggtgcgcagcgagctcgcggaacgggataatatcagtgat
attgatgccttgatcatcaatccaaacagcagtcatcccatagcactaagtgcagtggcc
gaagtatcacttcaactaggcccctcggcaataaaccgcatcagccaacaacgggtcgca
ctcgtatcggcaaaccttgcctacggtgatttaagtgatgcagtggctacagcgcaggac
atcttgtcacaacaagtacttcctgcatcggtacaagcccgctttggtggtcaaaatgaa
gaaatggagcactcgttccaatccctcaaaattgcccttatcttagccattttcttagtg
tatttagtgatggcgagtcaatttgagtctctgcttcatcccctattaatcctctttgca
gtacctatggcactgggtggcagtattcttgggctctaccttacccaaactcatttgagt
gtggtggtgtttattggtcttattatgctggcaggtattgtggtcaacaacgccattgta
ctggttgatcgtattaatcaattacgttctgaaggcgtacaaagacttcatgcgataagt
gtggcggcaaaatcacgcctacgtcccattatgatgaccacactcactactacccttggt
ttactaccaatggccttaggtttaggtgatggttcagaggtgcgtgccccaatggcgatt
acagtgatctttggtctgagtttatcgactttactgaccttaattgtgctgccagtgctt
tacgccctattcgaccggaaaacctatgccgtgacggactcacatgtcagcgttgaggag
gctcgcccatga
DBGET
integrated database retrieval system
