Shewanella sp. JNE2: MZ182_19830
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Entry
MZ182_19830 CDS
T08546
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shej
Shewanella sp. JNE2
Pathway
shej01501
beta-Lactam resistance
shej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MZ182_19830
01503 Cationic antimicrobial peptide (CAMP) resistance
MZ182_19830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shej02000
]
MZ182_19830
01504 Antimicrobial resistance genes [BR:
shej01504
]
MZ182_19830
Transporters [BR:
shej02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MZ182_19830
Antimicrobial resistance genes [BR:
shej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MZ182_19830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UPO31188
LinkDB
All DBs
Position
complement(4472239..4475373)
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPIFAWVIALIIMLAGILSIRSLPVSQYPSIAPPTVVISANYPGASAKIVEDS
VTQVIEQRMTGIDHLRYITSTSDSFGNASITLTFNAEADADIAQVQVQNKLQGAMTLLPQ
EVQSQGVNVNKSSSGFLLVLGFVSTDGSLDKSDIADYVGSNVQDPMSRVSGVGEIQIFGA
QYAMRIWLDPLKLTQYNLTSLDVVAAIRAQNAQVSAGQLGGTPSVAGQELNATVSAQSRL
QTPEEFRKIILKSDTSGANVFLGDVARVELGSESYSVVSLYNGKPATGLAIKLATGANAL
DTAEAVRAKIAEMKPFFPQGLEVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFLIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPLKKGHGHIETGFFGWFNRGFDRLTNRYESSVAGIIKRGFRV
MMIYVALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTLKVLEKVSDHFMAE
EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSERTAPGADVQSIAGRAMGVFSQMKDAFV
FAFVPPAVIELGTANGFDMFLQDKNGQGHEKLLAARNQLLGMAAQNPNLVGVRPNGQEDA
PIYQLHIDHAKLSALGIEIANVNSVLATAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQPG
DLDTWYVRNNKGDMVPFSAFAMGTWEYGSPRLERFNGLPAMNIQGATVPGFSTGAAMDIM
EDLVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVVLV
VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEYYEKGAGLVEATL
HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF
FVIVERIFSKRERKAKDEKPTSAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttttttattgatcgccccatctttgcgtgggtgatcgccttaattattatg
ttggcggggatcctatcaatccgttctctgccagtgtctcaatatccgagcattgcacct
ccaactgtggtgatcagtgctaactaccccggcgcttcggctaagattgttgaggactca
gtcactcaggttattgagcagcggatgacggggatcgaccatctgcgctatatcacttca
accagtgatagttttggtaacgcgtctattaccctaacctttaacgcagaagccgatgcc
gacattgcacaggttcaggttcaaaacaagttgcaaggggcgatgacgctgctgccacag
gaagtgcaatcacagggcgttaatgttaacaaatccagctctggcttcttattggtttta
ggcttcgtgtcaacggatggttcactggataagagtgatatcgctgactatgtaggttct
aacgtacaagatcctatgagccgtgtttctggtgtgggtgagattcagatattcggcgct
caatacgcgatgcgtatatggttagatccgctaaaactaacccaatacaatttgactagc
ttggatgttgtcgcggctattcgcgctcaaaacgcacaggtttctgcgggtcaactgggt
ggtacgccatcggttgctggtcaagagctaaatgcgacagtatcagcccaaagccgttta
caaacaccagaagaattccgcaagattattcttaaatctgatacttctggcgcgaacgtt
ttcttgggtgatgttgctagagttgagttaggttctgaaagttattccgttgtatcccta
tacaatggtaagcctgcaacaggtctagcgattaaactcgcgacgggggcaaatgctctc
gataccgcagaagctgtccgagctaaaatcgctgagatgaaacctttcttcccacaaggg
ttggaagtcgtttatccctatgacactacaccttttgttgaaaaatccattgaaggcgtt
gtacacacattgttagaagccgttgtactggtgtttctcatcatgtacctcttcttgcaa
aatttccgtgcaactttgatcccaacgattgctgttcctgtggtattgctgggtaccttc
gctatattgtcggcaacggggttctcgatcaatacgctcactatgtttgctatggtgctg
gcgatcggtttgctggtagacgacgcgattgtggtggtggagaacgtcgagcgggtgatg
tcggaagagggactcagtccgcttgaggcgactcgtaaatcgatggatcaaatcaccggc
gccttggttggtatcggtttgacgctatctgcggtatttgtccctatggcatttatgtct
ggctcaacaggggtgatttatcgtcagttctcaatcactatcgtgtcggcgatggcgttg
tctgtattggtggctttgattttaacgccagcactttgtgcgaccatgctcaagccactc
aagaagggtcacggccatattgaaacgggattcttcggttggtttaaccgtggttttgat
cgattaaccaaccgttatgagtcgagtgtggcgggtatcatcaagcgtggctttagggtc
atgatgatttacgttgcactggttgttgccgtcggttggatcttcatgcgtatgccaacc
gctttcttgccagatgaagaccaaggtattttgtttacgcaggccattttaccgacaaac
tcaactcaagaaagtaccttaaaagtcttagagaaagtgtctgatcactttatggctgaa
gagggtgtgagatcagtatttagcgtggcgggctttagttttgcgggtcaagggcaaaat
atgggtatcgctttcgtggggctgaaggattggtctgagcgtacggctcctggtgctgat
gttcaatccattgcgggtcgtgctatgggcgtattcagtcaaatgaaggacgcgtttgtc
ttcgccttcgtaccgcctgcggtgattgagttaggtacggctaacggttttgatatgttc
ttacaggataagaatggtcaaggccatgaaaagttactggctgcacgaaatcagctatta
ggtatggcggcacagaatcctaatctagtgggcgtacgtcctaatggtcaggaagatgcg
ccaatttaccaattgcatatagatcacgctaagttaagcgcgctcggcattgaaatcgct
aatgttaacagtgtgcttgcaacggcttggggtggttcatatgtgaacgactttattgac
cgtggccgtgttaaaaaggtttatgtacaaggtgatgctcagtaccgtatgcaaccgggt
gatttagacacttggtatgtacgcaataataaaggtgatatggtgccattctctgccttc
gctatgggtacgtgggagtatggctctccacgcctagaacgctttaatggtttgccagcg
atgaatattcaaggagctacagttccaggatttagtactggtgctgccatggatattatg
gaagatctggtcaagcagttgcctcctggctttggcattgagtggaacggtttatcctac
gaagagcgtttgtcgggtaaccaagcacctgcgttatatgcactgtcaatcttagtggta
ttcctcgtacttgctgctctttatgaaagctggtcggtaccctttgccgttgtgctggtg
gtgccgttggggattattggtgcattgttagcgatgaatggtcgtggtttaccaaacgac
gtattcttccaagtaggtctacttacaacggttggcttagcgactaagaacgcaatcttg
attgtggagtttgctaaagagtactacgaaaaaggcgctggtttagtggaggcgacgctt
catgcggttcgcgttcgtctgcgtccgattttgatgacgtccttagcctttggtttgggt
gttgtgccattagcgatcagtactggcgtcggttctggtagccaaaacgccatcggtact
ggtgttcttggtggtatgatgagctcgaccttcttaggtatcttcttcgtgcccttattc
ttcgttattgttgagcgtatcttcagtaagcgagagagaaaagcgaaagacgaaaagccg
acatcggcggagtaa
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