Shewanella sp. LZH-2: JM642_02375
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Entry
JM642_02375 CDS
T10525
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00540
Lipopolysaccharide biosynthesis
shel01100
Metabolic pathways
Module
shel_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JM642_02375 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shel01005
]
JM642_02375 (lpxC)
Enzymes [BR:
shel01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
JM642_02375 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
shel01005
]
Lipid A
JM642_02375 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QRK79991
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All DBs
Position
509018..509938
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AA seq
306 aa
AA seq
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MIFQRTVQKMVKATGVGLHSGNKVTLSIMPAPVNTGIVLVRTDISPAVAIPAKAEQVRET
TMCTALVNDEGIRISTIEHLFAALAGLGIDNAVIEVDAPEIPIMDGSASPFVFLLQSAGI
KEQSAPKKYLKIKRPVRVEDGDKWAELKPFKGFRVNFKIDFAHPEIARSQQHVVMDFSTS
AFVKDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAILGEFTAYKTGHALNNQLVRALLAQQDAWELVSFEKEADVPVSFAVP
GGAVFA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcaaagaactgttcaaaaaatggtgaaagctaccggagtcggtttgcactct
gggaataaagtcaccttgagcattatgcccgcaccagtcaatacagggatcgtacttgtg
cgtaccgatattagtcctgccgttgctattcctgcaaaggcggaacaagttcgcgaaacc
acgatgtgcacggcacttgtcaatgacgaaggtattcgtatttcgactattgagcattta
tttgcagccttagcgggtttaggcattgataacgccgtaatcgaagtggacgcccctgaa
atcccaattatggatggcagtgcgagcccatttgtcttcttacttcagtctgcgggtatt
aaagagcagtctgcacctaagaagtacttaaagattaaacgccctgtgcgtgttgaagac
ggtgataagtgggccgagctcaagcctttcaaaggttttagagtcaactttaaaattgac
tttgctcaccccgaaattgctcgcagccaacagcatgtggtgatggacttctctacttca
gcttttgttaaagacattagccgcgctcgtacttttggttttatgcgtgatattgagtat
ctgcgtgcgaataacctagcattaggtggcagcatggaaaacgcagttgtacttgatgaa
tatcgcgtcctcaaccccgacggcctgcgttatgaggatgagttcgttaagcacaaaatt
ttagatgcgtttggtgatctctatgtggcaggacacgccattcttggtgagtttactgcc
tataaaacgggtcatgctctgaataaccagttagtacgtgccttattggcgcagcaagat
gcgtgggagttagtgagctttgagaaagaagccgatgtccccgttagctttgctgtacct
ggtggcgcggtcttcgcttaa
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