Shewanella sp. LZH-2: JM642_08250
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Entry
JM642_08250 CDS
T10525
Symbol
cdd
Name
(GenBank) cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00240
Pyrimidine metabolism
shel01100
Metabolic pathways
shel01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JM642_08250 (cdd)
Enzymes [BR:
shel01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
JM642_08250 (cdd)
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Paralog
GFIT
Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
Zn_ribbon_TOP3B
DddA-like
Motif
Other DBs
NCBI-ProteinID:
QRK81052
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All DBs
Position
complement(1839001..1839891)
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AA seq
296 aa
AA seq
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MQDRFIRSITQLPTPLADALIPLLHQGFAGHIDVQQLAELVKSSNMTESEVLLALLPIAA
ALAKPPISEFYVGAIAKGKSGDIYMGANLELPGEALFHSVHAEQSAISHAWLSGESQIVD
MIVNASPCGHCRQFMNELVEGGQIKIHLPSQDSHLLSYYLPYAFGPKDLNVQSPLLVKQE
TEFALDSSDPMVIEALDHAGLSYAPYTQSYAAVVLETADGATYCGRYAENAAFNPSMLPM
QMALSNLTRHNRDFGEIRRAVLVESSQGKISLVGAAMDALHAVAAIELEHIVVDPI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagatttatccgaagcataacccagctgccaaccccattggctgacgcatta
attcccttattacatcaaggttttgcgggacatatcgatgtacagcaactggcagagtta
gtcaaaagcagcaatatgaccgaatcagaggtgttactggctttgttacctattgccgcc
gccttggccaaaccacccattagtgagttttatgttggtgcaattgccaaaggaaaaagt
ggcgacatttatatgggtgccaacttagaactgcctggcgaagccctcttccactcagta
cacgcagagcaaagcgctattagtcacgcgtggcttagcggcgaaagccagattgtggat
atgatcgtgaacgccagtccctgcggtcattgccgtcagtttatgaatgaattagtcgaa
ggcggccaaatcaagatccatttgccatcacaggatagccatttattgtcctattatctg
ccctatgcgtttgggccaaaagacttaaatgttcagtcaccgctgttagtcaagcaggaa
actgaatttgcactcgatagcagtgatcctatggtaattgaagccttagatcatgcgggc
ttaagctatgcaccttatacccaaagctatgcggcggttgtattagaaaccgcggatggc
gcaacctactgtggtcgctacgctgaaaacgccgcgtttaacccatcgatgctcccaatg
caaatggcgctatcgaatctgactcggcataatcgtgattttggtgagatccgccgcgcg
gtattggtggaatcctcccaaggtaaaatcagcttagtgggcgcagcaatggatgcattg
catgctgttgccgcgatagaactcgaacatattgtggttgatcctatctag
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