Shewanella sp. LZH-2: JM642_08960
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Entry
JM642_08960 CDS
T10525
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00220
Arginine biosynthesis
shel00250
Alanine, aspartate and glutamate metabolism
shel00430
Taurine and hypotaurine metabolism
shel00910
Nitrogen metabolism
shel01100
Metabolic pathways
shel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
JM642_08960
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JM642_08960
00220 Arginine biosynthesis
JM642_08960
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
JM642_08960
Enzymes [BR:
shel01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
JM642_08960
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
QRK81182
LinkDB
All DBs
Position
1994891..1999735
Genome browser
AA seq
1614 aa
AA seq
DB search
MALKDAMPSVLLENVVSLIHAKVPNSQAKQVEQFATCLYAHMSKDDLNARNDSDLYGAVL
SLWNALNKTPKGETHLRVFNPSQSKHGWQSTHSIIEVIQPDMPFLVDSVGMALNRMGITA
HMMLHTPLAIERSAQEVTKVTYLKQSPDSTEQVAVFLIEIDRQNSSADIKALEREIQSVL
GDVAASVNDWEAMSAKLSETIKDLPKRPFPGEKQELEEAINFLTYLNNHHFTLLGYRQYD
LKRVEGDVELVPNMASSLGLMNKHHKAQPEQGLLLSSFSDSARKEALDHSLLILTKSSAK
SRVHRPAYVDYIGIKRFDKKGNVVGEDRFIGLYASNVYNRSPREIPLLNEKVQRVLDRSG
LTPRSHDYKALLNILENLPRDELIQANVEDLAHTAHGVLEMQDRDKLKLFVRKDGFGRFL
SCLVYVSKDRYNTKLRQDTQRILAQHFNSKEDVEFTTYFSESTLARTHYIVKVDNNNMDV
DVAAIENNLIEAARSWEDKLNTALNNALGEEAGTHLMKRYANAFEQSYKEDVLPSSAVVD
MQQLEALDDEHKLGMLFYQPQEAALNDNKVRLKLFHKDEPIHLSDVLPMLENFGLRVINE
RPYEVTTSDGSTFWILDFLMTVKVANTDNIADSQDRFQTALSQVWQKKLEDDGFNRIILA
SGLTGREVSVLRAYAKYMRQIDATFSQAYIEETFGRYPQIADLLVKMFIRKFNPKLKTRT
LGKFMEQINLRLDEVSSLDDDRIIRRYLDLINATLRTNFYQLDAKGEPKSYISFKFMPSM
IPEMPRPLPKFEIFVYSPRVEGVHLRGGKVARGGLRWSDRREDFRTEVLGLVKAQQVKNT
VIVPVGAKGGFVCKQLPTEGGREAFFTEGQECYRIFIRALLDITDNIVNGEIVHPVDVVR
HDEDDPYLVVAADKGTATFSDIANAISQEYNFWLGDAFASGGSNGYDHKKMGITAKGGWE
SVKRHFREVGIDCQTTDFTCLGIGDMAGDVFGNGMLLSKHTKLVAAFNHMHIFIDPNPDA
AASYEERARLFALPRSSWEDYNSKLISKGGGIFLRSSKSIPLSAEMKQMLETEKASMTPT
ELMKELLKMPVDLIWNGGIGTYVKSSRETNAEVGDRANDALRVNGRELRAKIVGEGGNLG
CTQLGRIEYAANGGRINTDFVDNVGGVDCSDNEVNIKILLNALVAEGELTLKQRNRLLEE
MTEEVGQIVLQDCKDQTRTISVTQVRGAEQLKEQIRFIQYLEKEGKLDRALEFLPSEEEL
AERLANGRALTRPELSVLVAYAKMVLKEQLLTPEITEDTLLSQLLIAYFPKKLQELYSHK
MVTHPLRGEIIATSLANELVNDMGLNFVQRMQDETGASVADAAICYTMAREVFGLAELTK
SITDLNGIVPAVVQGEMLHQLRRNMRRACRWFLRHRNRSWSIEQTVAFFKPVFEQLKANV
HSYLVEEEAAGIQAEINALIKENVPQDVASTVANMSTLFSTLDIAQIAQTEEKTVALVAE
TYFKLGARVELHWFLEQISAQPVTNHWQALARAAFREELDWQQRALTSVVLRTCSATCNA
QSVISQWIDTNQALLERWFHMLADFKTSQSHEFAKFSVALRELNLLILHCEGQK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaagatgcaatgccttcagtactacttgaaaatgtagtcagtttaattcac
gctaaagtccctaattcacaagccaagcaagttgaacagttcgcgacctgcctttatgcc
cacatgtcgaaagacgacctcaatgcgcgtaatgacagcgatctgtacggtgccgttctc
agtttatggaatgcactgaataaaaccccgaaaggggaaactcacctcagagtattcaac
ccaagtcagtctaaacacggctggcaatcgacccattcgatcattgaagtcatccaacct
gatatgccattcttggttgattctgttggtatggcattgaatcgcatgggtattacggcc
catatgatgttacacactccgctggcgattgagcgttcagcgcaagaagtcactaaagta
acctacttgaagcaaagccctgacagcactgagcaggtcgcggttttcctgattgaaatc
gatcgtcaaaacagtagcgcggatatcaaagcccttgagcgtgaaatccaatcagtgctt
ggcgatgtcgccgcatcagttaatgactgggaagccatgtcagctaagctgagtgagact
attaaagacctgcctaagcgtccattccccggtgagaagcaagagttagaagaagcgatt
aacttcctaacttatcttaataatcatcattttaccttacttggctaccgtcaatacgat
ttaaaacgtgttgaaggggatgttgagttggtgccgaatatggcctcgagtttaggctta
atgaacaagcaccataaggctcaaccagagcaaggtttgttactatcaagcttctctgat
agtgcgcgtaaagaagccttagatcacagtttgttgatcctgacgaagagcagcgccaag
agccgtgtgcaccgtccagcctatgttgattatatcggtatcaaacgcttcgacaaaaaa
ggcaatgtggttggtgaagacagattcatcggtttatacgcttcaaacgtgtataaccgc
agcccacgtgagatcccgctgctgaacgaaaaagttcaacgtgtattagatcgctcaggt
ttaacgccacgttctcacgattacaaagccctactgaacattctcgaaaacttaccgcgc
gatgagctaattcaagccaatgtggaagatttagcacacacagcgcacggtgtgctcgag
atgcaagacagggataaactgaaactctttgttcgtaaagatggtttcgggcgtttctta
tcctgtttagtgtatgtttctaaagatcgttacaacactaaacttcgccaagatacccag
cgtattctggcccagcatttcaacagcaaagaagatgtagagtttacgacgtatttctcc
gagtcaaccctggcccgtactcactacattgtcaaagttgataacaataatatggatgta
gatgtggctgccatagagaacaatttaattgaagcggcacgttcttgggaagataagtta
aatactgcgctaaacaacgccttaggtgaagaagccggtactcatctgatgaagcgttac
gctaacgccttcgaacaaagctataaagaagatgtattgccaagctcggccgttgtggat
atgcaacagcttgaagcactagatgacgaacacaagttaggcatgttgttctatcaaccg
caggaagctgcgctgaacgacaacaaagtgcgtttaaaactgttccataaagatgaacca
atccatctttctgacgtactgccaatgctggaaaactttggtctgcgcgtgatcaacgag
cgcccttatgaagtgacgacctcagacggttcaaccttctggatcttagacttcttaatg
acggtcaaagtcgccaatactgacaacatcgccgatagccaagacagattccaaacggca
ctgtctcaagtgtggcaaaagaaattagaagatgacggttttaaccgtatcattctggcg
tcaggtttaacgggccgtgaagtatccgtactgcgtgcttacgctaaatacatgcgtcaa
atcgatgcgacattcagccaagcttatattgaagaaacctttggtcgttatccacaaatc
gctgatttgttggtaaaaatgtttatccgtaagttcaatccaaaactgaaaacccgcaca
ttgggcaagtttatggagcagatcaacctacgtttagacgaagtatcgagcttagatgat
gaccgtattatccgtcgttacctcgatctgattaacgctacgctgcggacaaacttctat
caattagatgctaagggtgaaccgaagagctatatctccttcaagtttatgccttcgatg
atccctgaaatgccacgcccactaccgaaattcgaaattttcgtttattcgccacgggtt
gaaggtgtgcatttacgtggtggtaaagtggctcgtggtggtttgcgttggtctgaccgt
cgtgaagacttccgtaccgaagtgcttggcttagtgaaagcacagcaagtgaaaaacacc
gttattgtccctgtaggggcaaaaggtggtttcgtttgtaagcagctgccaactgaaggg
ggccgtgaggcgttcttcactgaaggccaagagtgctaccgcatctttattcgtgcactg
ctcgatattactgacaacatcgttaacggtgaaatcgtacatccagtagatgtggtgcgt
catgatgaggatgatccatatctcgttgtggctgcggataaaggcactgcgaccttctct
gatatcgctaacgctatttcccaagaatacaatttctggttaggtgatgcgttcgcatcg
ggtggtagtaatggttacgaccataagaaaatgggtatcacggctaaaggtggctgggaa
tctgttaagcgccatttccgcgaagtgggtatcgattgccaaactaccgactttacctgt
ttaggtatcggcgatatggcgggtgacgtatttggtaacggtatgttgttgtctaagcac
acaaaacttgtggccgcattcaaccatatgcatatctttatcgatccaaatcctgatgct
gccgccagttatgaagagcgtgcccgtttgttcgcactgccacgttcaagctgggaagac
tacaacagcaaactgatctctaaaggtggcggcatcttcctgcgttcatctaagtcgatt
ccattatctgctgaaatgaagcaaatgctggaaacggaaaaggcgtcgatgacaccaacc
gagttgatgaaagagctgctgaaaatgccagtcgatctgatttggaacggtggtatcggt
acttacgttaagtcttcccgcgaaacgaatgctgaagtcggcgaccgcgctaacgatgca
ctgcgcgtcaatggtcgtgaactgcgcgccaagatcgtgggcgagggtggtaacttaggt
tgtacccaattaggtcgtattgagtacgcggccaacggtggtcgtatcaacactgacttc
gtggataacgtaggtggtgtagattgttctgacaacgaagtaaacatcaagattctgtta
aacgcgttagtggctgagggggaattgacactcaagcaacgtaaccgtttactggaagag
atgaccgaagaagtgggtcaaattgttctacaagactgtaaagaccaaactcgcacgatt
tcggtgactcaagtccgtggtgcagaacaactaaaagagcaaattcgctttatccagtat
ctggagaaagaaggcaagttagaccgtgcgttagaattcttaccttcggaagaagaactc
gcagaacgtctagctaatggccgtgcattaacgcgtccagagctatcagtgctggtggct
tacgctaagatggtgctgaaagagcagttactcacccctgaaatcactgaagatacattg
ttgagccaattgttgattgcatacttcccgaaaaaacttcaggaactgtacagtcataaa
atggttacgcacccactgcgcggtgaaatcattgctacatcgctggccaacgagttggtc
aacgacatggggcttaactttgttcaacgtatgcaagatgagacaggtgcctcagttgcc
gatgcggcgatttgttacactatggctcgcgaagtctttggtttagcggaactaactaaa
tcaatcactgacttaaacggtattgtacctgctgtggttcaaggtgaaatgttgcaccag
ttacgtcgtaatatgcgtcgtgcatgccgctggttcctgcgtcaccgtaatcgtagttgg
agcattgagcaaactgttgccttcttcaaacctgtatttgaacaactcaaagcgaatgtt
cattcatacttagtcgaagaagaagcggcaggtatccaagctgagatcaatgctctgatt
aaagagaatgtgcctcaggatgttgcctctaccgttgctaatatgagcacactgttctct
acacttgatattgcgcaaattgcgcagacagaagagaagacagttgcgcttgttgccgag
acttatttcaaactcggtgcccgtgttgagctgcactggttcctagaacagatcagtgcg
caacccgttactaaccattggcaagcactggcccgtgcagcctttagggaagagctggat
tggcagcaacgtgcgttaacgtcagtggttttaagaacgtgcagtgcaacctgtaacgca
cagagcgtgatttcccagtggattgatactaatcaagccttactggaaagatggttccat
atgctagctgactttaaaacgtcgcaaagccatgagtttgctaagttctctgtcgcccta
cgtgaacttaaccttctgatccttcactgcgaagggcaaaagtaa
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