Shewanella sp. LZH-2: JM642_09100
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Entry
JM642_09100 CDS
T10525
Name
(GenBank) RimK family alpha-L-glutamate ligase
KO
K14940
gamma-F420-2:alpha-L-glutamate ligase [EC:
6.3.2.32
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00680
Methane metabolism
shel01100
Metabolic pathways
shel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
JM642_09100
Enzymes [BR:
shel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.32 coenzyme gamma-F420-2:alpha-L-glutamate ligase
JM642_09100
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Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_YheCD
ATP-grasp_LDMS
CPSase_L_D2
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QRK81209
LinkDB
All DBs
Position
complement(2032839..2033798)
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AA seq
319 aa
AA seq
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MRGWILYKETATQLKPEWYEIERLLAAAKADNIELAVYAPDEFDLTVTREDNKSILLNGQ
PVELPDFIIPRMGSGTTYFALAIIRHLERLGVYCLNPSKAIEIVKDKLFSQQLLAEKNLP
TPKTMLVKFPVDIDLVERHLGFPVVIKTLSGSQGSGVFLSHKAREFDDLMQLIEATNKNA
NIILQEFIANSHGRDLRVFTIGGRVAGCYERRGQEDSFKANVSAGGSARPFEITPEIEWL
ATQTANILDLDVAGIDLLFDNGHYKICEANSSPGFEGLESCLNVDIAAQILHFIRIRLGM
FNKDEKSSEPTSAANTHNN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggttggattttatataaagaaaccgcgactcagctaaaacctgaatggtatgaa
atcgaacgtctgttggcggcagctaaggccgacaatattgaattagccgtttatgcgccg
gatgagtttgatctcaccgtgacgagagaagataacaaaagtattttgttaaatggacaa
cccgttgaattgccggattttatcattccgcgcatgggttctggcaccacctactttgcg
ttggcaatcattcgccatttagaacgcttaggggtgtattgtttaaatccttcaaaagcc
attgagattgttaaagataagctcttctcccagcaattgttggccgagaagaatttacct
acgccaaaaaccatgttggtcaaattcccggttgatattgatctggttgagcgacattta
ggttttcccgtagtgattaaaacgctctcaggctctcaaggcagtggtgtattcttatca
cacaaagcccgtgagtttgatgacttaatgcaactaatcgaagcgactaataaaaacgcc
aacattattttgcaagagttcattgccaatagtcatggccgcgacttgcgagtctttact
attggcggacgcgttgcaggctgctacgagcgacgtgggcaagaagatagctttaaagct
aatgtcagcgcgggtggctcggcgaggccctttgaaatcacccctgaaatcgaatggctc
gcgacgcaaaccgccaatattctcgatttagatgtggcaggtatcgatttattgttcgat
aacggccattacaaaatctgcgaagccaactcatcacctgggtttgaaggattagaatcg
tgcttaaatgtggatattgctgcgcaaattttgcactttatccgcatccgtttaggcatg
tttaacaaggacgagaaaagcagcgagccaacatcggccgctaacacgcataacaattga
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