Shewanella sp. LZH-2: JM642_17135
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Entry
JM642_17135 CDS
T10525
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00020
Citrate cycle (TCA cycle)
shel00270
Cysteine and methionine metabolism
shel00620
Pyruvate metabolism
shel00630
Glyoxylate and dicarboxylate metabolism
shel00680
Methane metabolism
shel00710
Carbon fixation by Calvin cycle
shel00720
Other carbon fixation pathways
shel01100
Metabolic pathways
shel01110
Biosynthesis of secondary metabolites
shel01120
Microbial metabolism in diverse environments
shel01200
Carbon metabolism
Module
shel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shel_M00012
Glyoxylate cycle
shel_M00168
CAM (Crassulacean acid metabolism), dark
shel_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JM642_17135 (mdh)
00620 Pyruvate metabolism
JM642_17135 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
JM642_17135 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
JM642_17135 (mdh)
00720 Other carbon fixation pathways
JM642_17135 (mdh)
00680 Methane metabolism
JM642_17135 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JM642_17135 (mdh)
Enzymes [BR:
shel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
JM642_17135 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QRK78975
LinkDB
All DBs
Position
complement(3900404..3901339)
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AA seq
311 aa
AA seq
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MKVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAG
EDPTPALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGIITNP
VNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKINVIGGHSGV
TILPLLSQVEGVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVR
GLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLK
GDIKLGVDFVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgtacttggtgctgctggtggtatcggccaggctcttgccctactgtta
aaaactcaattacctgcgggttctcaactgtctctatacgatatcgcaccggtaactccg
ggtgttgcggttgacttgagccatatcccaactgcggttgaaatcaaaggttttgctggt
gaagatccaacgcctgccctcgtgggtgctgacgttgtgcttatctctgctggtgttgca
cgtaagcctggtatggatcgttcagatctgttcaatatcaacgcgggtatcgttcgcaac
ctgatcgagaaagtggctgttacttgccctaaagcgctcgtgggtattatcactaaccca
gtaaacactacagttgctattgctgctgaagtgctgaaaaaagcaggtgtttacgataag
aaccgtttattcggcgtgaccactctggacgttatccgttctgagactttcatcgctgaa
ttaaaaggcttaaacgttgctgacgttaaaatcaacgtgatcggcggccacagtggcgtg
actattctgccattactgtctcaagttgaaggcgtgactttctctgatgaagaagtagct
tctttaactaaacgtatccaaaacgcgggtactgaagtggttgaagctaaagccggtggc
ggcagcgcgacactgtctatgggtcaagcggcatgccgtttcggtatgtctctggttcgt
ggtctgcaaggcgaagctaacatcgttgaatgtgcttacgttgacggcggcagcgaacac
gctgaattcttcgctcaaccagtattgttaggcaaaaacggtatcgaaaaagtactgcct
tacggtgaagtgagcgcattcgaagctaacgcccgtgattctatgttagatacgctgaaa
ggcgatatcaaactaggcgttgatttcgttaagtaa
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