Shewanella sp. LZH-2: JM642_19740
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Entry
JM642_19740 CDS
T10525
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shel Shewanella sp. LZH-2
Pathway
shel01501
beta-Lactam resistance
shel01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM642_19740
01503 Cationic antimicrobial peptide (CAMP) resistance
JM642_19740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shel03036
]
JM642_19740
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_19740
01504 Antimicrobial resistance genes [BR:
shel01504
]
JM642_19740
Chromosome and associated proteins [BR:
shel03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JM642_19740
Transporters [BR:
shel02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JM642_19740
Antimicrobial resistance genes [BR:
shel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JM642_19740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
DUF5801
GPS2_interact
Motif
Other DBs
NCBI-ProteinID:
QRK79463
LinkDB
All DBs
Position
complement(4503221..4504369)
Genome browser
AA seq
382 aa
AA seq
DB search
MRQTIKLASVISVALWMAACSPQEDKAAHGGAGPQSMEVGIIKVEAKPQVIQVELPGRSK
AFLEAEVRPQVNGIITKRSFVEGGNVKQGESLYQIDSAPYKAALVSANADLARANASLAS
AKAKAARYQQLVKTNAISKQDFDEAEAAYKEALASVTVAEAAINTAKINLQYTEVLAPIS
GRIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLKQGKLQAADNA
DVQLVLEDGTIYGHNGKLQFAEVSVDENTGSVILRAEFPNPDGILLPGMYVRAVLNTGTD
PQAILVPQKAITRNAKGQAVAMVVNDQGLVEAKIVTTAEVIDNQWRITAGLEAGDKLIVE
GLQKIRPGAPVTTKVISETQAK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagacaattaaacttgcctcagtaatcagcgtggcgttgtggatggcagcttgt
agccctcaagaggataaagccgctcatggcggcgcggggccgcagagcatggaagttggg
ataatcaaagtggaggctaagccacaggttatccaagtcgagttaccgggtcgtagcaag
gcatttcttgaagccgaagttcgtcctcaagtgaatggcattatcactaagcgtagcttt
gtcgaaggcggcaatgtgaagcaaggcgaatctctttatcaaattgattctgcgccttat
aaagccgcacttgtcagtgcaaatgctgacttagctcgagcaaatgcaagccttgcttct
gccaaggcaaaagcggctcgttatcagcagttagttaaaactaacgcgatcagtaaacaa
gatttcgacgaagccgaagccgcttacaaagaagcgctggccagtgtgactgtagcggaa
gcggcaatcaatactgcgaaaatcaatcttcaatacactgaagtattagcgccgatttca
ggccgtatcggtaagtcgagtgtaacagcgggtgcgctagtcacggctaaccaaagccaa
actctggcaaccattcaacagcttgatcctatcaatgtggatatcgctcaatcgagtgcc
cagctgttacgcctaaaagccaaactgaagcaaggtaagctgcaggcggcggacaatgct
gacgtgcagttagtcttagaagacggcacgatttatggtcacaacggtaagctgcaattt
gctgaagtgagcgtggatgaaaatactggctcagtgatcctgcgcgccgagttccctaac
ccagatggcatcttactgcctggcatgtatgttcgtgctgtattgaataccggtaccgat
cctcaagccatcctagtgccgcaaaaagccattacccgtaacgctaagggtcaggccgtg
gcgatggtggtgaacgatcaaggtctagtggaagcaaaaattgttacaacagctgaagtt
atcgacaatcaatggcgtattactgctggtttagaagcgggcgataagttgattgtggaa
ggattacaaaagatccgtccaggtgcaccagtcaccaccaaagttatttctgaaacccaa
gcaaaatag
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