Shewanella sp. LZH-2: JM642_20275
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Entry
JM642_20275 CDS
T10525
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18145
membrane fusion protein, multidrug efflux system
Organism
shel Shewanella sp. LZH-2
Pathway
shel01501
beta-Lactam resistance
Module
shel_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM642_20275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_20275
01504 Antimicrobial resistance genes [BR:
shel01504
]
JM642_20275
Transporters [BR:
shel02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JM642_20275
Antimicrobial resistance genes [BR:
shel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
JM642_20275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QRK79563
LinkDB
All DBs
Position
complement(4626960..4628114)
Genome browser
AA seq
384 aa
AA seq
DB search
MFSKKRHLNLVLLVGIAVMGLMGCDSAEQEENPPSLIQVSVITLDNEALLVTEDLPGRVV
AVRSAEIRAQVSGIVQHRLFEQGSEVTSGTVLFQIDPAQFKADVAIAAAALQRAEAVLVR
SRQETARLASLLKTEAVSQQMFDDAISLRDQAAADVAQSQATLTRRQLDLEFASVKAPIS
GQIDQALVSEGALVSPTDTTPMARIQQIDQVYVDVRLPASMLDSMRQQANEANPELSVEI
LSSSGESLGMKGHILFSGSEVDTGTGDVLLRVLVDNPQHRLLPGLFVKTRVPKTYYSSTL
RVPQQTVTRKAGQPQVWVLNAEGKVQPVAIKVDELVAGRYRVISGLSAGQQIVVEGIERL
SPDAQVHARLWQPTAEQQLSADVR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaaaaacggcatttaaacttggtactcttggtaggaattgccgtaatggga
ttgatgggttgcgactccgcggagcaggaggaaaatcccccctctctaatccaggtttct
gtaatcacactggataacgaagcactattggtcacagaagatctacctggtcgagttgtt
gctgttcgcagtgcagagatccgcgcgcaagttagcggcatagttcaacatcgtctgttc
gaacaaggcagcgaggtaacatctggcacagtgctattccagattgatcctgcacaattt
aaagccgatgttgctattgcggcagccgccttgcaacgagccgaagccgtattggttcgt
tctcgccaggaaacggcacgcttggcctccctgttaaaaaccgaagcggttagccaacaa
atgtttgatgatgcaatttccctgcgcgatcaagccgcagcagatgtcgcccaatcccaa
gcgacacttacgcggcgccagttagatttagaatttgccagcgtcaaagcccctatatca
gggcaaattgatcaagccttagtgagtgaaggagccttagtctcaccgactgataccacc
ccaatggcgaggatccaacaaattgaccaagtgtatgtcgatgttcgactgccagcatca
atgttagacagcatgcgccagcaagcaaacgaagctaacccagagttaagcgtagagatc
ctaagcagcagcggtgagtctcttggcatgaaaggtcatatcttattttcgggctccgag
gtggatacaggtaccggcgatgtactgctgcgtgtactcgttgataatccacaacatcgc
ctattgcccggtctttttgtaaaaactcgggttccaaagacttactattcttccactctg
agagtgccacaacagacggtcacccgtaaggcgggtcaaccccaagtatgggtactcaat
gcggagggcaaggtacagccagtagcaattaaagtcgatgagctagtggcaggccgctac
cgcgtgatatcaggactatctgctggccagcagatagtcgttgaaggcatcgaacggcta
agtcctgatgcgcaggttcatgctcggctttggcaacccacagcagagcagcaattaagt
gccgatgtgcgctga
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