Shewanella sp. MTB7: HWQ47_00600
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Entry
HWQ47_00600 CDS
T10730
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shem Shewanella sp. MTB7
Pathway
shem01501
beta-Lactam resistance
shem01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HWQ47_00600
01503 Cationic antimicrobial peptide (CAMP) resistance
HWQ47_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shem03036
]
HWQ47_00600
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_00600
01504 Antimicrobial resistance genes [BR:
shem01504
]
HWQ47_00600
Chromosome and associated proteins [BR:
shem03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HWQ47_00600
Transporters [BR:
shem02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HWQ47_00600
Antimicrobial resistance genes [BR:
shem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HWQ47_00600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
YknX_C
HH_EMRA
BSH_CzcB
GPS2_interact
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WBJ95669
LinkDB
All DBs
Position
128676..129848
Genome browser
AA seq
390 aa
AA seq
DB search
MRQIVKIASVISVALWITACGQKANENQGAGAPKSVEVSVMDVVSGPQSIFVELPGRSKA
YLEAEVRPQVSGIITERSFIEGGDVEKGQSLYQIDPATYKAVVISAEADLARANASLVSA
KAKAARSNELVKINAISQQDFDDAEALYKEALASVTVAEAAIHTAKINLEYTQVQAPISG
HIGVSNVTAGALVTANQTQILTKIQQLDPINVDIAQSSVQLLRLKAKLKQGELKATNNAD
VSLVLEDGTTYPQKGLLQFSEVSVDENTGSVILRAEFPNPDGILMPGMYVRALLNTGTDS
EAILVPQKAITRNPKGQAIAMLVNAQNKVESRVVTTAEVIDNQWRITKGLAVGDKLVVEG
LQKIRAGSTVTTVPASANKQVKQPASPSDK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaatagtgaaaattgcctctgttattagcgtggcgttatggataactgcttgt
gggcaaaaagcgaatgaaaatcaaggcgcgggtgcacctaagagtgtcgaagttagcgtg
atggacgttgtgtctggccctcagtctatttttgtagagctccctggtcgaagtaaagcc
tatttagaagctgaggttcgtcctcaagtttcgggaattattaccgaacgtagttttatc
gaaggtggggatgtggaaaaggggcagtcgttatatcaaattgatcccgccacttataaa
gctgtggtgataagtgctgaagctgatcttgcccgtgcaaatgcaagtctggtatcggct
aaagccaaggctgcacgttctaatgaactggttaagattaacgctattagtcaacaagat
ttcgatgatgctgaggcgctatataaagaagctttggccagtgtgacggtagcggaagct
gcaatacacacagctaaaatcaatctagaatacacgcaagtgcaagcccctatttctggc
catattggtgtgtctaatgtgactgctggtgcgttggttacggctaaccaaacgcaaatt
ttaactaaaattcaacagctagatcctattaacgtggatatcgctcagtcgagtgttcaa
ttgcttcggttaaaagctaaattgaaacagggtgaattaaaagcgactaataatgctgat
gtcagtttggttttggaagatggtactacttatcctcaaaaaggcttgttgcagttctct
gaggtgagcgtcgatgagaacacggggtctgtgatattaagagccgagtttcctaatcct
gacggtattttaatgcctggcatgtatgtgcgcgcgctgctaaatacaggcacagattca
gaagcgattttagttcctcagaaggccattacccgtaatcctaaaggtcaagctattgcc
atgttagtcaatgcccagaacaaggttgaatcacgtgtagtgacgactgctgaggtgatt
gataaccagtggcgtatcaccaaaggtttagcggttggcgataagttggttgttgagggc
ttgcaaaaaattcgtgctggatcaacggttactacggttcccgcatcagccaataagcag
gtaaaacagcctgctagtccatctgataaatag
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