Shewanella sp. MTB7: HWQ47_04850
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Entry
HWQ47_04850 CDS
T10730
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shem Shewanella sp. MTB7
Pathway
shem01501
beta-Lactam resistance
shem01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HWQ47_04850
01503 Cationic antimicrobial peptide (CAMP) resistance
HWQ47_04850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shem03036
]
HWQ47_04850
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_04850
01504 Antimicrobial resistance genes [BR:
shem01504
]
HWQ47_04850
Chromosome and associated proteins [BR:
shem03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HWQ47_04850
Transporters [BR:
shem02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HWQ47_04850
Antimicrobial resistance genes [BR:
shem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HWQ47_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
WBJ96456
LinkDB
All DBs
Position
complement(1190622..1191683)
Genome browser
AA seq
353 aa
AA seq
DB search
MTSSTSCYRRHCYLAFISLMLLTSFSLHAADTKTETIKVSLSDHIRWIELDAKLEAVKAA
TVSAQTSGRVLSLNYDVNDIVPQGAPLLEITSKEQGATLAAAEAELARSVAHNTQAQLTR
QRYSALFPQGAISQGNMDEATAQAKSAEQAVSAANANLIRANESLTYTSVAAPFSGIVTH
RYVEEGETVSPGQALLSGFSLDQMRAVTQVPQRYIDALKQQPKFEISLNDGRRFQSDKLT
IFSFADPQSHSYKVRILLPEDEANLMPGMWAKAKFSAGVTRNITLPKSTLIERGELTAVY
RQLGDRFVLNQVRIGRTEHDTVEILSGLDEGDIVALDAYQVLLDKQVVSQPSR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactagctcaacgagttgttatcgtcgccattgctatttagcattcatcagcttaatg
ctgctaacgagtttctctttacatgctgcagatacaaagacagaaacgattaaggtgtcg
ttaagtgatcacattcgttggattgaactcgatgccaaactcgaagccgttaaggcagct
acggtatcagcacaaacttcagggcgcgtgttatcacttaactatgatgtcaatgatatc
gtgcctcagggagcacctctgctggagatcaccagtaaggaacaaggggcgacactggcc
gctgccgaggctgaacttgccagatcagtagcccataacactcaagctcaactcaccaga
caacgttattcagccttattcccacaaggggcaatatctcaggggaatatggatgaagcc
acagctcaggcaaagtcagctgagcaagcagtatccgcggctaacgcaaaccttatccgc
gccaacgaatcactcacctacacctcagttgcagcaccattttcagggattgtcacccac
agatatgttgaagagggcgaaaccgtcagcccaggccaagcgctgctatcaggcttttcg
ttagaccagatgcgcgccgtaactcaagtgcctcaacgttacattgacgccttgaaacaa
caacctaaatttgaaatatccctcaacgatggacgccgctttcaatcggataagttaact
atcttctctttcgccgatccccaaagtcacagctataaagtgcggattttgctgcccgaa
gatgaagcaaaccttatgccgggtatgtgggctaaggccaaattcagtgctggtgttacc
cgcaatatcaccctgcctaagtcaaccctgattgaacgcggcgaactcacagcggtgtat
cgacaactcggtgatcgcttcgtgcttaatcaagtgcggatcggcagaactgaacatgac
actgtcgagatattgtccggcctagatgaaggcgacattgtggcgcttgacgcataccaa
gtgcttctcgataagcaagttgtcagtcagccaagtaggtaa
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