Shewanella sp. Pdp11: AYJ58_00650
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Entry
AYJ58_00650 CDS
T11329
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00540
Lipopolysaccharide biosynthesis
shep01100
Metabolic pathways
Module
shep_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AYJ58_00650 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shep01005
]
AYJ58_00650 (lpxC)
Enzymes [BR:
shep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
AYJ58_00650 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
shep01005
]
Lipid A
AYJ58_00650 (lpxC)
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
AUD58082
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Position
complement(141331..142251)
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AA seq
306 aa
AA seq
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MIFQRTVQKMVKTTGVGLHSGNKVTLSIMPAPVNSGIVLVRTDLSPAVAIPAKAEQVRET
TMCTALVNDEGIRISTIEHLFAALAGLGIDNAVIEVDAPEIPIMDGSASPFVFLLQSAGI
KEQAAPKKYLKIKRPVRVEDGDKWAELKPFKGFRVNFKIDFAHPEIARSQQHVVMDFSTS
AFVKDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAILGEFTAYKTGHALNNQLVRALLAQQDAWELVSFEKEADVPVSFTVP
GGAVFA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcaacgaactgttcagaaaatggtgaaaacaactggtgtcggattgcattct
ggcaacaaggtcactttgagcattatgcccgcgcccgttaattcagggatcgtactcgtg
cgcaccgatttgagtcctgccgtcgccattccagcgaaggcggagcaagttcgtgaaacc
actatgtgtacggcacttgtcaatgacgaaggtattcgtatctcgaccattgagcattta
tttgcagctcttgcgggtttaggcatagataacgctgtaatcgaagtggacgcgcctgaa
attcctattatggatggcagtgcaagcccattcgtcttcttgttgcagtctgctggtatt
aaagagcaggccgcgcctaagaagtatttaaagattaagcgccctgtgcgcgttgaagat
ggcgataaatgggccgagttaaaaccttttaaaggttttagagtcaattttaaaattgat
tttgcgcatccagaaatcgctcgtagccaacagcatgtggtgatggacttttcaacttct
gctttcgtgaaagatatcagccgtgcccgtacttttgggtttatgcgtgatatcgaatat
ttgcgagccaacaacctagcgttgggcggtagcatggaaaacgctgttgtacttgatgaa
tatcgcgtccttaatcccgacggcctgcgttatgaggacgaatttgttaagcacaaaatt
ctagatgcgtttggtgatctatatgtggcaggacacgctattttaggtgagtttactgcg
tataaaaccggtcatgcgctgaacaaccaattggtgcgtgctttactcgcgcaacaggat
gcgtgggagttggttagcttcgaaaaagaagccgatgtccccgtcagctttaccgtacca
ggtggcgctgtatttgcttaa
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