Shewanella sp. Pdp11: AYJ58_00700
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Entry
AYJ58_00700 CDS
T11329
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00300
Lysine biosynthesis
shep00550
Peptidoglycan biosynthesis
shep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYJ58_00700 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYJ58_00700 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shep01011
]
AYJ58_00700 (murE)
Enzymes [BR:
shep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AYJ58_00700 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
shep01011
]
Precursor biosynthesis
Amino acid ligase
AYJ58_00700 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AUD58092
LinkDB
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Position
complement(153318..154817)
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AA seq
499 aa
AA seq
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MMLLRDLLAPWLHYAGAQSFNDLTLDSRAIRRGDVFLALPGHKVDGRQFIEKALDLGAAA
VLVHTDDADLHGKVLLSDNAEHGVQIYVFQLSRQVSAIAAQRYPLAHQSATTSLGVIGIT
GTNGKTSTSQLIAQLITSLGRKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHDFEAQ
GASVCAMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMESYAAAKQSLFRFSTLG
HGLLNLDDAVGASWLTELKSVPAQMWGFSIEGHQGAAFYTKNAKFDDQGVSATLVWPEGE
TQIHSPLLGAFNLSNLLAALSALYLQGFDMKALAEQVQYLTPVAGRMERFTTANNITLVV
DYAHTPDAIEQALNALRRHCAGDLWCVFGCGGDRDKGKRPLMGQAAEQYADRIMMTSDNA
RSEDPAQIITDIIQGLIHPQQALTQVDRIAAIKEVVALAKPGDVILLAGKGHETYQEAAG
VRHDYDERALARQLSEQSR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatgttattacgggatctgctcgcgccttggctgcattatgccggcgcgcagtccttc
aacgatttgaccttagatagccgcgcaatacgtcgcggcgatgtgtttttggcactgcca
gggcataaggtcgatggcagacagtttattgaaaaagccttagatttaggtgctgcagcc
gtattagtccacacggatgatgctgatctgcatggcaaagtgttgctcagcgataatgcc
gagcacggcgtacagatttatgttttccagttgagccgccaagtatcggccatcgccgcc
cagcgttatccattagcgcatcagtctgcgacaacatcccttggggtgattggtattact
ggaactaatggtaagacctcgacaagccaactgattgcccagctgataacgtcgctcggc
cgcaaagccgccgtgatgggcacccttggcaatggcctctggggtgagcttgtcgatagc
ggtaacaccacagccgatgctattaccttaatgcgtcagttgcatgactttgaagcccaa
ggcgcgagtgtttgcgctatggaagtgtcgagccacggcttagtgcaaggccgagtcgac
gctgtccccttcgatgttgccgtgttcaccaatctgacgcgggatcacctcgattaccat
ggcgacatggaaagctatgccgccgctaagcaaagcctatttcgtttcagcaccttaggt
cacggtttattgaatctcgacgacgcagttggcgcatcttggttgactgaacttaaatct
gtgcctgcgcaaatgtggggctttagtattgaaggtcatcaaggtgcggctttttatact
aaaaatgccaagtttgacgatcaaggcgtcagtgcaaccttagtgtggcccgagggcgaa
acacaaattcactccccactacttggtgcctttaatctttctaatttactcgcggcgcta
tcggctttgtatctgcaaggttttgatatgaaagcgttagccgagcaagtgcaataccta
acgcccgtcgcaggtcgtatggagcgtttcactactgcgaataacattaccttagtggtc
gattatgcccatacacccgatgcgattgaacaagcgttaaacgcgctacgtcgccattgt
gccggtgatttatggtgcgtatttggctgtggtggcgaccgtgataagggcaagcgtcct
ttgatgggccaagccgcagagcaatatgccgaccgcattatgatgaccagcgacaatgcg
cgtagtgaagaccccgcgcaaattattaccgatattatccaagggctaatccaccctcag
caggcattgactcaggttgaccgtatcgcagcaattaaagaggttgtggcattggcgaaa
cctggcgatgtgatcttgctggcgggcaagggccacgaaacttaccaagaggcggcaggt
gtgcgtcatgactatgatgaacgcgccctggcacgccagttatcggagcaatcaagatga
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