Shewanella sp. WE21: CKQ84_06955
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Entry
CKQ84_06955 CDS
T05404
Name
(GenBank) DNA-binding response regulator
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
shew
Shewanella sp. WE21
Pathway
shew01503
Cationic antimicrobial peptide (CAMP) resistance
shew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_06955
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CKQ84_06955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shew02022
]
CKQ84_06955
01504 Antimicrobial resistance genes [BR:
shew01504
]
CKQ84_06955
Two-component system [BR:
shew02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
CKQ84_06955
Antimicrobial resistance genes [BR:
shew01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
CKQ84_06955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
AVI65649
LinkDB
All DBs
Position
1629338..1630033
Genome browser
AA seq
231 aa
AA seq
DB search
MRLLLVEDDIELQTNLKQHLLDAHYSIDVASDGEEGLFQALEYNYDAAIIDVGLPKLDGI
ALIRSVREQKRDFPILILTARDSWQDKVEGLDAGADDYLTKPFHPQELIARLKALIRRSA
GKASPLIYNGPFSLNTSSLEVRKGEELVNLSGSEYKLFEFFMLHQGEVKSKTVLTEHIYD
QDFDLDSNVIEVFIRRLRKKLDPDNQYNLIETLRGQGYRLKALTSGQAADE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgttactagttgaagatgatatagaactacagactaacttaaagcaacatctc
ctcgatgcccattacagtatcgatgtggcgagtgatggtgaagaaggcttatttcaagcg
ctcgaatacaactatgatgcagcaattatcgatgtaggtttacctaaactcgatggtatc
gccttgatccgtagcgtgcgtgaacaaaaacgcgactttcctatcctgattttaaccgca
agagacagttggcaagataaggttgaaggactcgatgctggtgccgacgactatctgacg
aaacctttccatccccaagaactcatcgcacgactaaaagccctgatccgtcgctctgct
ggtaaggccagccccctgatctacaacggcccctttagccttaacaccagcagtctagaa
gtacgtaaaggcgaagaactggttaatctcagtggttctgaatacaagctattcgaattt
tttatgttgcatcaaggcgaagtcaaatcaaaaactgtactcacagagcatatctacgat
caggattttgatttagattctaacgtcatcgaagtctttatccgccggttacgcaaaaaa
ctcgacccagataatcaatacaacttaattgaaactctgcgcggccaaggttatcgccta
aaagcgttaacgtccgggcaagcagccgatgagtaa
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