Shewanella sp. WE21: CKQ84_10355
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Entry
CKQ84_10355 CDS
T05404
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00300
Lysine biosynthesis
shew00550
Peptidoglycan biosynthesis
shew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CKQ84_10355
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKQ84_10355
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
CKQ84_10355
Enzymes [BR:
shew01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CKQ84_10355
Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
Precursor biosynthesis
Amino acid ligase
CKQ84_10355
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AVI66241
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Position
2389582..2391084
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AA seq
500 aa
AA seq
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MMLLRDLLAPWLHYAGAQSFNDLTLDSRAIRRGDVFLALPGHKVDGRQFIEKALDLGAVG
VLVHTDDADQHGKVLLGDNAEHGVQIYFFQLSRQVSAIAAQRYPLAHKSAVMPSLGVIGI
TGTNGKTSTSQLIAQLVTSLGRKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFEA
QGANVCAMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMESYAAAKQSLFRFSTL
GHGLLNLDDAVGVSWLTELKSVPAQMWGFSIEGHQAAAFYTKNAKFDDQGVSATLVWPEG
ETQIHSPLLGAFNLSNLLAALSALYLQGFDMKALAEQVQYLTPVAGRMERFTTADNITLV
VDYAHTPDAIEQALNALRRHCAGDLWCVFGCGGDRDKGKRPLMGQAAEQFADRIMVTSDN
ARSEDPAQIITDIIQGLATPEQALTQVDRITAIKEVVALAKPGDVILLAGKGHETYQEAA
GVRHDYDERALARQLSEQSR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatgttattacgggatctgctcgcgccttggctgcattatgccggcgcgcagtccttc
aatgatctgaccttagatagccgcgcaatacgtcgcggcgatgtgtttttggcgctgcca
ggacataaggtcgatggcagacagtttattgaaaaagccttagatttaggtgccgtaggc
gtattagttcacacggatgatgctgaccaacatggcaaagtgctgctgggcgataatgcc
gagcacggtgtgcagatttatttctttcagttaagtcgtcaggtatcggcaattgccgcc
cagcgttatcccttagcgcacaagtctgccgttatgccatcccttggggttatcggtatt
accggaactaacggtaaaacctctacgagtcaactcattgcacaactggtaacttcattg
gggcgcaaagccgccgtcatgggcacccttggcaatggtctctggggcgagcttgttgat
agtggtaacaccacagccgatgcgattaccttaatgcgtcagttgcatgagtttgaagcc
caaggcgcgaacgtctgcgccatggaagtgtcgagtcacggcttagtgcaaggccgcgtc
gacgcagtaccatttgatgttgccgtgttcactaatctgacgcgcgatcacctcgattac
cacggcgatatggaaagctatgccgccgctaaacaaagcctatttcgtttcagcacttta
ggtcacggtttattgaatctcgacgatgcagttggcgtgtcttggttgactgaacttaaa
tctgtgcctgcgcaaatgtggggctttagtattgaaggtcatcaagccgcggctttttat
actaaaaatgccaagtttgacgatcaaggtgtcagtgcaaccttagtgtggcccgagggc
gagactcaaatccactcgccacttcttggtgcctttaatctctctaatttactcgcggcg
ttatcggccttgtatctgcaaggttttgatatgaaagcgttagccgagcaggtgcaatat
ttaacgcccgttgcaggtcgtatggagcgtttcactactgcggataacatcaccttagtg
gtcgattatgcccatacacccgatgcgatcgaacaagcgttaaacgcgctacgtcgccat
tgtgctggtgatttatggtgcgtgtttggttgtggcggcgaccgtgataagggcaagcgt
cctttgatgggccaagctgctgaacagtttgccgaccgcattatggtgaccagcgacaat
gcgcgcagtgaagaccccgcgcaaattattaccgatattatccaagggcttgcaacacca
gagcaggcattgactcaggttgaccgtatcacagcaattaaagaggttgtggcattggct
aaacctggcgatgtgatcttgctggcgggcaagggccacgaaacttaccaagaggcggca
ggtgtgcgtcatgactatgatgaacgcgccttggcacgccagttatcggagcaatcaaga
tga
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