KEGG   Shewanella sp. WE21: CKQ84_19380
Entry
CKQ84_19380       CDS       T05404                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
shew  Shewanella sp. WE21
Pathway
shew03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CKQ84_19380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shew03400]
    CKQ84_19380
Enzymes [BR:shew01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CKQ84_19380
DNA repair and recombination proteins [BR:shew03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CKQ84_19380
 Prokaryotic type
     CKQ84_19380
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8 Aldose_epim HHH_5
Other DBs
NCBI-ProteinID: AVI67821
LinkDB
Position
complement(4354066..4354707)
AA seq 213 aa
MNQEKRIQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
AHSIYALGVEGLKQYIKTIGLYNNKAINVIKACEILIEKYNGEVPENREALESLPGVGRK
TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEEKMLKVVPAEFKVDVHHWFI
LHGRYTCLARKPRCGSCIIEDLCDFKEKIYPED
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaatcaagaaaaacgtatccagatcctcactcgtcttcgcgataacaatcccaaacct
gaaaccgaactcaatttttcaagtcccttcgaactgctagtggcagtgacgttatcggcc
caagcaacagatgtgagcgtcaacaaggcaacagacaagctctttcctgtggcaaacaca
gcccacagcatttatgcccttggcgtagaaggtttaaagcaatacataaaaaccataggc
ttatataacaacaaagccatcaatgtgatcaaagcctgtgagatcttgattgaaaagtac
aatggcgaagtaccagaaaaccgcgaagccctagagtctctgcccggcgttggccgcaag
acggctaacgtggtactaaacactgcctttggttggccaaccatcgccgtcgacacccat
attttccgcctcgccaatcgcactaaattcgcgcccggcaagaacgtagtcgaagtggaa
gagaaaatgctaaaagtcgtgccggcggaatttaaagtcgatgtgcaccactggtttatc
ctgcacggacgctacacttgccttgcgcgcaaaccccgctgtggcagctgtatcattgaa
gacttgtgtgattttaaagaaaaaatttatcctgaagattaa

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