Shewanella sp. WE21: CKQ84_21430
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Entry
CKQ84_21430 CDS
T05404
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00020
Citrate cycle (TCA cycle)
shew00785
Lipoic acid metabolism
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
shew01200
Carbon metabolism
shew01210
2-Oxocarboxylic acid metabolism
Module
shew_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shew_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CKQ84_21430 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CKQ84_21430 (sucA)
Enzymes [BR:
shew01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CKQ84_21430 (sucA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
AVI68189
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All DBs
Position
complement(4811277..4814108)
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AA seq
943 aa
AA seq
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MHQGIMKAWLESSHLSGANSTYVEEMYEAYQEDPQSVADDWRAVFDNLPPVNGASVDAPE
AAHSKVRDYFRSLALEGRHKSSARVTDPEMDAKQVKVLQLINAHRFRGHQGANLDPLELW
KREPVADLDPAFHGLTKEDMEREFNTGSFAHGGETMKLADLVKALKATYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDKSVKTRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVIGSVRARQDRRGCKDGLQVMPIT
IHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHADTRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFVSQLAVDYRNEFKRDVVVELVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENVMAADDVTGLINNYRDALDQGDCVVKEWRPMTLHSVDW
TPYIGREWDEAYQASMSAERLQSLADKLSYVPESHPLQSRVAKIYSDRLAMAKGEKPLDW
GFAETLAYASILEDNKRVRITGQDSGRGTFFHRHAVLHNQNDGTTYMPLRNIADEQGPID
ITDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQMCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
IVMSPKSLLRHPLAVSSLEELANGSFQNVIGEIDTLEASKVDRVVFCSGKVYFELLEKRR
KENITNVALIRVEQLYPFPHDEMIVALADYQHVKDFVWCQEEPQNQGAWYSSQHHFWAAV
PAGAQLTYAGREASAAPACGYPELHTHQQESLVNSALKLTITL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcctggctcgaatcatctcacttaagtggtgcaaattcg
acctacgtagaagagatgtatgaagcctatcaagaagacccacagtcagtcgctgatgat
tggcgtgcggtatttgataatctccctcctgtgaacggtgcctctgttgatgcgcctgaa
gctgctcactcaaaagtacgtgattattttcgcagtttagcgttagaaggtcgccataag
agctcggctcgtgtgacggatcctgaaatggatgctaagcaagttaaagtcctgcaatta
attaacgcccatcgtttccgtggtcaccaaggtgctaatcttgatccccttgaactgtgg
aaacgtgaaccagtagctgatttagatcctgccttccacggcttgactaaagaagacatg
gaacgtgagtttaatacaggttcttttgctcatggtggcgaaaccatgaagctcgcggat
ttggtaaaagcgctgaaagccacctattgtggttctatcggtgctgaatatatgcacatt
accgataccgatgagaaacgctggatccaacaacgtctcgaaccttccttaggtaaagct
aactacgataaaagtgttaagacacgcattcttgaaggccttaacgccgcagaaggtatt
gaaaaatacttaggtgctaaattccctggtgcgaaacgtttctcgttagaaggcggtgat
gcgttagtgcctatgatgcgcgaaattatttatcgtgcaggtgaagccggtaccaaagaa
atcgtcgtcggtatggctcaccgtggtcgtctgaacgtgttagtgaacgtattaggtaag
cgtccagctgaactgtttgacgagttcgcaggtaagcatgctgatacccacggttctggt
gacgttaagtaccaccaaggtttctcctctgattttgaaacgccgggcggcaatgtgcat
ttagcactggccttcaacccatcgcaccttgaaatcgttaaccctgtggtcattggttct
gtacgtgcccgtcaagaccgtcgcggttgtaaggatggcttacaagtcatgcctattact
attcacggtgactctgccattgcgggtcaagggatagtacaagagacattcaacatgtct
caaacccgtggctttaaagtcggcggcagtattcgcatcgtagtgaacaaccaagtgggt
ttcactacgtctaaccatgcggacactcgttcgactgaatactgtactgacatcgctaag
atggttcaggcaccgattttccacgttaactctgatgatcccgaagccgttgcttttgtg
tcgcagttagccgttgattatcgtaacgagttcaaacgtgatgtggtggttgaattggtg
tgttatcgccgtcatggccataacgaagccgatgagccaagtgcaactcagccgctgatg
tatgccaagatcaagaaacacccaacgccacgtaagatttatgcagacaagctaatcgct
gaaaacgtgatggctgctgatgatgtgactggtcttatcaataattaccgtgatgcatta
gatcaaggtgattgtgtagttaaagaatggcgcccaatgacgctgcattctgttgattgg
acaccgtatattggtcgtgagtgggacgaagcgtatcaagcctctatgtcggctgagcgt
ttacaaagtctggctgacaaactgagctatgtacctgaaagtcatccattgcaatcacgg
gttgctaagatttatagcgaccgtttagcgatggcaaaaggcgagaagccactcgattgg
ggttttgcagaaacgctggcttatgcctcaattctggaagacaacaagcgtgtacgtatt
acaggtcaggattctggccgcggtactttcttccatcgtcatgctgtattgcacaatcaa
aacgatggcacgacttacatgccactgcgcaatattgctgatgaacaaggcccaattgat
attactgactcagtattatctgaagcctcagtactggcgtttgagtatggttatgccaca
gcagaacccggtggattgactatttgggaagcgcagtttggtgactttgctaactgtgcc
caagtggtaatcgatcagttcttgtcatcgggtgagcagaagtggggccgtttatgtggt
ctgactatgttgttaccccatggctatgaaggtcaaggccctgagcattcaagcgcccgt
ttagagcgtttcttgcagatgtgtgctaaccacaatatgcaagtgtgtgtgccttcaaca
cctgcacaggtctaccatatgttgcgccgccaagtggtgcgtcctatgcgtcgaccactt
atcgtcatgtcgcctaagtcattactacgtcatccattagcagtttcaagcttggaagaa
ttagccaatggcagtttccaaaatgtgatcggtgaaatcgatacgttggaagcaagcaag
gttgaccgagttgtcttctgcagtggtaaggtttacttcgagctgctggaaaaacgtcgt
aaagaaaatatcactaacgtagcgttaatccgtgtcgaacagttatacccgttcccacat
gatgaaatgatcgttgctttggctgattaccaacatgtgaaagattttgtttggtgtcag
gaagagccacagaaccaaggtgcttggtactctagtcaacaccatttctgggccgcggtt
cctgcaggtgcacagttaacttatgctggtcgtgaagcgtcagctgcaccagcgtgtggt
taccctgagttgcacacacatcagcaagaatctttagtgaacagtgccctgaaacttaca
atcacactgtag
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