Shewanella sp. YLB-09: FS418_01805
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Entry
FS418_01805 CDS
T11533
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00540
Lipopolysaccharide biosynthesis
shey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FS418_01805 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shey01005
]
FS418_01805 (lpxC)
Enzymes [BR:
shey01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
FS418_01805 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
shey01005
]
Lipid A
FS418_01805 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QFU20736
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All DBs
Position
415501..416421
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AA seq
306 aa
AA seq
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MIFQRTVKEMVKTTGVGLHSGNKVTLSIKPAPVNSGIVLVRTDLEPAVSIPAKAELVRET
TMCTALVNDDGVRISTIEHLFAALAGLGIDNAIIEVDAPEIPIMDGSASPFVFLLQSVGI
QEQTAAKKYVRITKTIRVEDGDKWAELKPYKGFKINFTIDFDHPEIARSQQHMEMDFSSS
AFIRDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYKVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGYAIVGEFCAYKTGHALNNQLVRALLAQQDAWELVSFEKEEEAPVSFSVP
SSAVFA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcaaagaactgttaaagaaatggtaaaaactaccggcgtcggattgcattcc
ggcaataaggtaactttgagtatcaagcctgcgccagtaaattcaggtatcgtattagtg
agaacagacttggagcctgcagtttcgatccctgccaaggctgaacttgtccgtgaaacc
actatgtgtacggccctagtgaatgatgatggtgttcgtatttcgacaattgagcacctt
tttgctgcacttgctggattaggtatcgataatgcgattatcgaagtcgatgcaccagaa
attccaattatggatggcagtgccagcccatttgtttttctattacaatcggttggaatt
caagagcagacggcagcaaaaaaatacgtaagaattactaaaaccatacgcgttgaagac
ggtgataagtgggcagaattaaaaccttataaaggttttaagatcaacttcacaattgat
tttgatcatcctgaaattgcccgtagtcagcaacatatggaaatggacttttcttcttct
gcttttattcgtgatattagtcgtgctagaacatttggttttatgcgtgatatcgaatat
ttacgtgccaacaacttagcgttgggcggaagtatggaaaatgccgtagtgcttgacgaa
tataaagttcttaaccccgatggcctgcgttatgaggacgaattcgttaagcacaaaata
ttagatgcctttggagacttatacgttgcaggatatgccattgttggcgagttctgtgcg
tataaaactggacatgcattaaacaatcaattagttagagctctacttgcccagcaagat
gcttgggagttagtcagctttgagaaagaagaagaggcacctgtgagtttttctgttcca
agcagtgccgtattcgcttaa
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