Shewanella sp. FDAARGOS_354: CEQ32_06655
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Entry
CEQ32_06655 CDS
T04944
Name
(GenBank) AcrB/AcrD/AcrF family protein
KO
K18138
multidrug efflux pump
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf01501
beta-Lactam resistance
shf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CEQ32_06655
01503 Cationic antimicrobial peptide (CAMP) resistance
CEQ32_06655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_06655
01504 Antimicrobial resistance genes [BR:
shf01504
]
CEQ32_06655
Transporters [BR:
shf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CEQ32_06655
Antimicrobial resistance genes [BR:
shf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CEQ32_06655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
ASF14715
LinkDB
All DBs
Position
1468219..1471482
Genome browser
AA seq
1087 aa
AA seq
DB search
MSIISTSVKRPVTVWMFMLAIMLFGMVGFSRLAVKLLPDLSYPTLTIRTMYDGAAPVEVE
QLVSKPIEEAVGVVKGLRKISSISRSGMSDVVLEFEWGTTMDMASLDVREKLDTIALPLD
VKKPLLLRFNPNLDPIMRLALSVPNATETELKQMRTYAEEELKRRLEALSGVAAVRLSGG
LEQEVHIQLNQEKLSQLNLNADDIKRRINEENINLSAGKVIQGDREYLVRTLNQFNSLEE
LGHVIVYRDAQTLVRLFEVATITDAFKERSDITRIGSQESIELAIYKEGDANTVAVAKKL
RDELLKINKDPQQNKLEVIYDQSEFIESAVSEVTSSALIGSILSMLVIYLFLRNIIPTLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAIGLLVDNAIVVLENIDRCRSEGMSKL
DAAVTGTKEVAGAIFASTMTTLAVFVPLVFVDGIAGALFSDQALTVTFALLASLLVALTS
IPMLASREGFKALPELMNKTPKEKPTTKLGKLKHYSATVFSFPIVLLFSYLPSALLTLVL
IIGRFFSWLFGLVMRPLSNGFNVVYHSIESIYHKLLALALRKQIMTLLLTIGITGACISL
LPRLGMELIPPMNQGEFYVEILLPPGTAVGETDRVLQQLAMSIKDRPEVKHAYSQAGSGG
LMTSDTARGGENWGRLQVVLGDHNAYHQVTQVLRDTARRIPELEAKIEQPELFSFKTPLE
IELTGYDLTLLKRSADNLVKALSASDRFADVNTSLRDGQPELSIRFDHARLAALGMDAPT
VANRIAQRVGGTVASQYTVRDRKIDILVRSQLDERDQISDIDTLIINPDSSQPIALSAVA
EVSLQLGPSAINRISQQRVALVSANLAYGDLSDAVAQAQQILSTQVLPASVQARFGGQNE
EMEHSFQSLKIALILAVFLVYLVMASQFESLLHPLLILFAVPMALAGSVLGLYITQTHLS
VVVFIGLIMLAGIVVNNAIVLVDRINQLRAEGVQKLEAIKVAAKSRLRPIMMTTLTTVLG
LLPMALGLGDGSEVRAPMAITVIFGLSLSTLLTLIVIPVLYALFDRKKFEHTATAQDNTA
ETAEARL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcattagcacctcagttaaacggccagtcacggtatggatgttcatgctggcc
attatgttattcggtatggtcgggttttcgcgcttagcggtaaaactcctgcccgattta
agctatcctaccctgacgatccgcaccatgtacgacggtgctgcgcccgttgaagtggag
cagctggtctcaaaacccattgaagaagccgtcggtgtggtgaaaggcttacgtaagatc
agctctatttctcgctcaggcatgtccgatgtggtactcgagtttgaatggggcactact
atggatatggcaagtctcgatgtgcgtgaaaaactcgacactatcgccctgccgcttgat
gttaaaaagccattactactgcgctttaaccccaaccttgatcctatcatgcgcctagcg
ctgtctgtaccaaatgccactgagacagagctcaaacagatgcgcacctacgcagaagaa
gagcttaagcgccgcctagaggctctttctggggttgccgctgtgcgtttatccggcggt
ttagaacaggaagtgcatattcagctcaatcaggaaaaattatcccaactcaatttaaat
gccgatgacattaagcgtcgcatcaacgaggaaaacatcaacttatctgcgggcaaagtg
atccaaggcgaccgcgaatatctggtacgaacccttaaccaattcaattcattggaagaa
ctagggcatgtgatcgtctatcgcgacgcacaaaccttagtacgtctatttgaagtcgct
acgattaccgatgcctttaaagagcgcagcgatatcacccgtatcggtagccaagaatcg
atagaactggctatttataaggaaggtgatgcaaacacggtcgccgttgccaaaaaattg
cgcgatgagctattgaagatcaacaaagatcctcagcagaacaaactggaagtgatttac
gatcaatcagaatttatcgaaagtgccgtcagtgaagtgacctcttcagcgttaataggc
agcattttgtccatgctggtgatttatctgttcctgcgcaatattatcccgacgctgatt
atctctatctcaatccccttctcggtgatcgctacctttaacatgatgtactttgccgat
atcagcttaaacatcatgtcattaggtggtattgcgctggcgattggtctgttggttgac
aacgcgattgtggtactcgaaaacatcgaccgctgtcgcagtgaaggcatgagtaaattg
gatgctgcggtcacgggtactaaggaggtcgctggcgcgattttcgcctcgacaatgacg
acgctcgcggtgtttgttcccttagtttttgtcgatgggattgctggcgccctcttttca
gatcaagccttaacggtgacctttgcgctcttggcctccttgctagttgccttaacctcg
attccgatgctggcctcacgggaaggatttaaagctttgccggagctcatgaataaaacg
ccgaaggaaaaaccgaccactaaacttggcaaattaaaacactatagtgcgacggtgttc
tccttcccgattgtgttgctatttagttacttgccgagtgccttactcaccttagtgttg
attattggccgcttcttttcgtggttgtttggcttagtgatgcgcccgctgagcaatggc
tttaatgttgtgtaccatagtatcgagtctatttaccataagctactggctttggcgctg
cgtaagcaaatcatgacgttactactgacgattgggatcacgggtgcctgtattagcttg
cttccccgtttaggaatggaattaattccaccgatgaaccaaggggaattctatgttgaa
atactgctaccacctggcacagctgtgggtgaaaccgatagggttttgcaacaactggcg
atgtcgattaaagacagaccagaagtgaaacatgcctacagccaagcgggcagcggaggg
ttaatgacctcagataccgctcgtggcggcgaaaactggggcagattacaggtcgtactt
ggagatcacaacgcctatcatcaggtgacgcaagtgctacgagacacggcgcgccgcatc
cccgagcttgaggcaaaaatcgagcaacctgaactctttagctttaagacgccattggag
attgagctaacaggctacgatttaaccttactaaaacgcagtgccgataaccttgttaag
gcgttgtcagcatctgatcgctttgccgatgtaaatactagcctgcgtgatggtcagcca
gaattgagcatccgtttcgatcatgctcgtttagccgcattaggaatggatgccccgacg
gttgccaatcgcattgcccaacgtgttggtggcactgtcgccagtcaatatacggttcgt
gatcgcaagattgatattctcgttcggagtcaactggatgagcgggatcaaattagcgac
atcgataccttaattatcaaccctgacagctcccaacccatagcccttagtgcagtagca
gaagtatcactgcaattaggcccatcggcgattaaccgtatcagtcaacaaagggtggcc
ttggtatcggcaaaccttgcctacggcgacttaagtgatgccgtagcccaggcacagcaa
atcctgtctacgcaggtattgccagcgtcggtgcaagcccgtttcggtggccagaatgag
gaaatggagcattcattccaatcactaaaaattgcattgatcctagctgtgttcttggta
tacctcgtgatggcaagccaatttgagtcactgctgcatccattgctcattttattcgct
gtaccaatggcactggctggaagtgtgcttggtctttatatcacccaaacccatctaagc
gtggtggtctttattggccttatcatgctggcggggatcgtcgtcaataatgccattgta
ttagtggatagaataaatcaactacgtgctgagggcgtgcagaagcttgaagccataaaa
gtcgcagcgaaatcccgtcttcgcccgattatgatgacaacgctcaccactgtactaggt
ctgctccctatggcattagggctaggcgatggctcagaagtccgtgcaccgatggcgatt
accgtgatctttggtctgagcctctcgaccctgttgaccctgattgttatcccagtgctc
tacgccctgtttgaccgtaaaaagtttgaacataccgccacagcgcaagacaacacggca
gaaaccgcggaggctcgcctatga
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