Shewanella sp. FDAARGOS_354: CEQ32_15695
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Entry
CEQ32_15695 CDS
T04944
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf01501
beta-Lactam resistance
shf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CEQ32_15695
01503 Cationic antimicrobial peptide (CAMP) resistance
CEQ32_15695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shf03036
]
CEQ32_15695
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_15695
01504 Antimicrobial resistance genes [BR:
shf01504
]
CEQ32_15695
Chromosome and associated proteins [BR:
shf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CEQ32_15695
Transporters [BR:
shf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CEQ32_15695
Antimicrobial resistance genes [BR:
shf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CEQ32_15695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
DUF5801
DHHW
GPS2_interact
Motif
Other DBs
NCBI-ProteinID:
ASF16301
LinkDB
All DBs
Position
complement(3516844..3517992)
Genome browser
AA seq
382 aa
AA seq
DB search
MRQTIKLASVISVALWMAACSPQEEKAGHAGAGPQSVEVGVINVATKPQVIQVELPGRSK
AFLEAEVRPQVNGIITKRSFVEGGHVKQGESLYQIDSAPYKAALVSANADLARANASLAS
AKAKAARYQQLVKTNAISKQDFDEAEAAYKEALASVTVAEAAINTAKINLEYTEVLAPIS
GRIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLQQGKLQAADNA
DVQLVLEDGTIYGHSGKLQFAEVSVDENTGSVILRAEFPNPDGILLPGMYVRAVLNTGTD
PQAILVPQKAISRNAKGQAVAMVVNDQGVVEAKIVTTAEVIDNQWRITAGLEAGDKLIVE
GLQKIRPGAPVTPKVISETQAQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagacaattaaacttgcctcagtaattagcgtggcgttgtggatggcagcttgt
agccctcaagaagagaaggctggtcatgctggcgctgggccgcagagtgttgaggtgggg
gtcatcaatgtggcgaccaagcctcaggttatccaagtcgaattaccgggccgtagcaag
gcgttcctcgaagccgaagtgcgtcctcaagtgaatggtattattaccaagcgtagcttt
gttgaaggcggtcatgtgaagcagggcgagtctctctatcaaatcgattctgcaccttat
aaagctgcattggtaagcgcaaatgccgatttagccagagcgaatgcgagtcttgcatcg
gctaaggcgaaagctgcccgttatcagcagttagtgaagactaacgccatcagtaagcag
gatttcgacgaagctgaagcggcttacaaagaagcgctggcgagtgtgactgtggctgaa
gcggcaatcaacactgccaaaattaacctcgaatacaccgaagtgttagcgcctatttca
ggccgtatcggtaaatcgagtgtgacagccggtgcgctggtgaccgctaaccaaagccaa
acgttggcgaccattcaacagctcgatcctatcaacgtggatatcgcgcagtcgagtgct
cagctgttacgtctaaaagccaagctgcagcaaggtaagctgcaggcggctgataacgct
gacgtgcagttagtcttagaagacggcacgatttatggccacagcggtaagctgcaattt
gctgaagtgagtgtggatgaaaacactggctcagtgatcctgcgtgcagagttccctaac
cccgatggcatcttactgcctggcatgtatgttcgcgccgtattgaatactggtaccgat
cctcaagccatcctagtgccgcaaaaagccattagccgtaacgctaagggtcaagccgtg
gctatggtggtgaacgatcaaggcgtagtggaagcaaaaattgttaccacagctgaagtt
atcgacaatcaatggcgtattactgccggtttggaagcgggcgataagttgattgtggaa
ggattacaaaagatccgtccaggtgcaccagtcactcccaaagttatttctgaaacccaa
gcacaatag
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