Shewanella sp. FDAARGOS_354: CEQ32_18650
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Entry
CEQ32_18650 CDS
T04944
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00300
Lysine biosynthesis
shf00550
Peptidoglycan biosynthesis
shf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CEQ32_18650
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CEQ32_18650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shf01011
]
CEQ32_18650
Enzymes [BR:
shf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CEQ32_18650
Peptidoglycan biosynthesis and degradation proteins [BR:
shf01011
]
Precursor biosynthesis
Amino acid ligase
CEQ32_18650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ASF16822
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Position
4139208..4140686
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AA seq
492 aa
AA seq
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MMLLRDLLAPWFSYAGEQTFQDLTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGAAA
VLVHTDNPQEQGKVIAAEQGVQIYFYDLAKHVSAVAAVRYPVVQGQSMAIVGITGTNGKT
STSQLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLREFADKGVNTCA
MEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAAAKQMLFRFDSLRHGLLNL
DDPVGIAWLSELANVPAKMWGFSIEAHTDATFYTKNAQFNDQGVQATLVWPEGEIDIRSP
LLGAFNLSNLLAALSALYLQGMDMRALAAKVPYLVPVSGRMERFTTADNITLVVDYAHTP
DAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGRAAEQFADRIMVTSDNARSEDPN
QIITDIIQGLTHPERALTEVDRVAAIKQVVAQAKSGDVILLAGKGHETYQEAAGVRHDYD
ERALARQLSEQR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ataatgttattaagggatctactcgccccttggttctcctacgcgggtgaacaaaccttc
caagatttgactctagatagccgcgcaatacgtcgcggcgatgtgtttttagcgctgcca
ggacacaaggtcgatggtcgtcagtttatcgataaggccttagcccaaggtgcggcggcg
gtgttagtgcatacggataatccccaagagcaaggcaaagttattgcggctgagcaaggc
gtgcagatttacttctacgacttagctaagcacgtttcagcggtggctgcggtgcgttat
cccgttgttcaaggtcaatctatggccattgtgggtattacagggactaatggcaaaact
tcgacaagccaattgtgcgcgcaattagtgaccctgcttgagggtaaagcggcggtgatg
ggcacgctcggcaatggcctgtggggcgagttagtcgatagcggtaatacgaccgccgat
gccattaccttaatgcgccaactgcgtgaatttgcagataaaggtgtaaatacctgtgcg
atggaagtctcgagccatggtttagttcaagggcgagtcgatgcagtgcccttcgatgtg
gcggtatttactaacctgacccgtgatcacttggactaccacggtgatatggaaaactat
gccgcggccaagcaaatgctgtttcgcttcgactctctgcgccacggcctactgaatctc
gatgatcccgtgggcatcgcttggttatccgagctggcaaacgttcctgcgaagatgtgg
ggctttagcattgaagcgcataccgatgcgacgttttacactaagaatgcccaattcaat
gaccaaggcgtgcaggcaaccttagtctggcccgagggcgaaatcgatattcgttccccg
ttattaggcgcctttaacctctcgaatttactcgctgcactatcagccctgtatttacag
ggaatggatatgcgtgcattagctgccaaggtaccttacttagtgcccgtgtctggccgt
atggaacgttttaccaccgcggacaacatcaccttagtcgtcgattatgcccacaccccc
gatgcgattgaacaggcacttaatgccctgcgtcgtcactgtgcaggggagctttggtgc
gtgtttggctgcggtggcgaccgtgacaagggtaagcggcctttaatggggcgtgcggcg
gagcaatttgccgatcgcattatggtgactagcgataatgcccgcagcgaagatcctaac
caaattattaccgatattatccaagggctgactcacccagagcgagcgctgaccgaggtt
gaccgtgtggctgcgattaaacaagtcgtcgcacaggctaaatctggggatgtgattttg
cttgcgggcaaaggccatgaaacttaccaagaggcggcaggtgtgcgtcatgactatgat
gaacgcgccctggcacgtcagttatcggagcaacgctaa
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